Oryza glaberrima (African rice): 127765622
Help
Entry
127765622 CDS
T08853
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1-like
KO
K25869
zinc finger protein IDD1/2
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127765622
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127765622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
Pep1_7
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
127765622
NCBI-ProteinID:
XP_052146526
LinkDB
All DBs
Position
3:4842075..4845094
Genome browser
AA seq
548 aa
AA seq
DB search
MEVETSSGTAERGAGAGAQQQPPPQPPAKKKRALPGMPDPDAEVIALSPKTLLATNRFVC
EICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALGDLTG
IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSRRDSFITHRA
FCDALAEESAKARAAPPPPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPPPPAAAPAPA
AQPEQRDRDAALDQFATPAPAPAPPPVTAPPPPPVAAPNDCVSSSSSGVAPTSQSLLSSM
FAPPSVAQAPQYADPIGVGAGGHQERAVPAKPPALCLAPNASSSLFTAPVPADRQQFAPP
PPPSPSPHMSATALLQKAAQMGATSSSSSFLRCLGLDMSSSSSAPPSSSGQQQQHHHHHH
QETMQVPLPASSLPEWPPRLQPEPSPMLSSGLGLGLPYDATGGPVSLPELMMGQSTLFSA
KPATLDFLGLGVSPTGASTSRGFPTFIQPIGGAVSLAGSATVAAETFGAAHGGQANPWER
NPSSSPIL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgagacgtcgtccgggacggccgagcgcggagcgggcgcgggcgcgcagcag
cagcctccgccgcagccgccggccaagaagaagcgtgcactccccggcatgccagatcct
gatgcggaggtgatcgcgctgtcgcccaagacgctgctggcgacgaacaggttcgtttgc
gagatctgcaacaaggggttccagcgcgaccagaacctgcagctgcaccggcgcgggcac
aacctgccgtggaagctgcggcagcggagcgggaaggaggtgcggaagcgggtgtacgtg
tgcccggagccgacgtgcgtgcaccacgacccgtcgcgggcgctcggcgacctcaccggc
atcaagaagcacttctgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctcc
aagaagtacgccgtccagtccgactggaaggcgcacaccaagacctgcggctcccgcgag
taccgctgcgactgcggcaccttattctcacggagggacagcttcatcacccaccgcgcc
ttctgcgacgccctggccgaggagagcgccaaggcgcgcgcggcgccgccgccgccggcc
gacgaggacgggacctcggcttctgccggtgcgccgccgccgcaagcgcctctaccacca
cccgcgccggtgccggcgccagcaccgccacctcctccggccgcagctccggctcccgcg
gcgcaaccggagcaacgagatcgggatgctgcactggatcagttcgccacgccggcgccg
gcgccggcgccgccgccagttactgctcctccgccgccgccggttgccgctcccaatgat
tgtgtcagcagcagcagtagcggcgtggcgccgacgtcgcaaagcctccttagcagcatg
tttgcaccgccgtcggtggcccaggcgccgcagtacgcggaccccatcggagttggagcg
ggtggccatcaggagcgcgcggtgcctgccaagcctccggcgctgtgcctcgcgcccaac
gcgtcgtcgtcgctgtttacggcgcctgtaccagctgaccggcagcagttcgctccgccg
ccaccgccgtccccgtcgccgcacatgtccgccacggcgttgcttcagaaggccgcgcag
atgggcgccacctcgtctagctcgtcctttctccgctgcctgggcctcgacatgtcatcg
tcatcgtcggcgccgccttcgtcgtcagggcagcagcaacagcaccaccaccatcaccac
caagaaaccatgcaagtgccactcccggcgagttcgctgcccgaatggccgccgcggtta
cagccggagccatccccaatgctgtcctccgggctcggcctcgggttaccatacgacgcg
acaggcggtccggtgagcttgccggagctcatgatgggtcagtccacactgttcagtgcc
aagccggcaacactagatttcttggggcttggagtgagcccgacaggcgcgtcgacaagc
aggggcttcccgacattcatccaacccatcggcggcgctgtcagcttggccgggagtgcc
accgtcgccgcggagaccttcggcgccgcccatggcggccaggcaaatccgtgggagagg
aacccgagtagctcaccaatcctgtaa
DBGET
integrated database retrieval system
