Oryza glaberrima (African rice): 127765862
Help
Entry
127765862 CDS
T08853
Name
(RefSeq) beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127765862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127765862
Membrane trafficking [BR:
ogl04131
]
Endosome - Golgi transport
Others
AP-1 complex
127765862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Arm_2
Coatomer_g_Cpla
Motif
Other DBs
NCBI-GeneID:
127765862
NCBI-ProteinID:
XP_052146785
LinkDB
All DBs
Position
3:complement(12877602..12883740)
Genome browser
AA seq
896 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLISDNNPMVVA
NAVAALAEIQDSSTRPIFEITSHTLSKLLTALNECTEWGQVFILDSLSRYKAADAREAEN
IVERVTPRLQHANCAVVLSAVKIILLQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLETFPEEPALV
QLQLLTATVKLFLKKPTEGPQQMIQAVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDSSLLDDLLSNISTLSSVYHKPPEAFVSRVKTAPRADDEEFADT
AETGYSESPSQGVDGASPSSSAGTSSNVPVKQPAAPAAPAPMPDLLGDLMGMDNSIVPVD
EPTAPSGPPLPVLLPSTTGQGLQISAQLVRRDGQIFYDISFDNGTQTVLDGFMIQFNKNT
FGLAAGGALQVSPLQPGTSARTLLPMVAFQNLSPGAPSSLLQVAVKNNQQPVWYFNDKIP
MHAFFGEDGKMERTSFLEAWKSLPDDNEFSKEFPSSVISSVDATVEHLAASNVFFIAKRK
NSNKDVLYMSAKIPRGIPFLIELTAAVGVPGVKCAVKTPNKEMVALFFEAMESLLK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcacgactccaagtacttctccaccaccaagaagggggagatccccgagctc
aaggaggagctcaactcccagtacaaggataagagaaaagatgctgtcaagaaagttatc
gctgctatgactgttggaaaagatgtttcatctttgtttaccgatgttgtgaactgcatg
cagactgagaacttggagctgaagaaactagtatatttatatctgattaactatgccaaa
agtcagcctgaccttgccatacttgctgtaaacacatttgttaaggattcacaagatcca
aatccactgattcgtgctttagctgtgaggacaatgggttgcatccgtgtggacaaaatc
acagagtatctgtgtgatcctcttcaaagatgcctcaaggatgatgatccatatgtacgg
aagactgcagctatttgtgttgctaagctttatgatataaatgctgagctagttgaggac
agaggattcctagaggcccttaaagacttaatatctgacaataatcctatggtagttgcc
aatgctgttgctgcgcttgcagagattcaggacagcagtactcgtccaatctttgaaatt
accagtcatacgctgtcaaagcttctgactgctctgaatgaatgcacagaatggggccag
gtttttattttggattctctgtcaaggtacaaagcagcagatgccagggaagcagaaaat
atagtggaacgggttacaccccgtctgcaacatgcaaattgtgctgttgttctctctgct
gtaaagataatccttttacaaatggagctcattactagcacagatgttgtccgtaatctc
tgtaagaaaatggcaccccctcttgttacgcttttgtcagcagaacctgagattcagtat
gtagcgttaaggaacattaatctgattgttcagaaaaggcccacaatacttgcacatgaa
attaaggtcttcttttgcaagtataatgacccaatatatgttaagatggaaaagttggag
attatgataaagcttgcctctgacagaaacatagatcaggttctattggaattcaaagag
tatgccacagaggtggatgttgactttgtccgcaaagctgttcgtgctattggaagatgt
gcaattaagttggagagagccgctgaaaggtgtatcagtgttttgcttgagctgattaag
ataaaggttaattatgttgtgcaggaggctataattgttattaaggacatcttcaggcgc
taccctaatacgtatgagtcgatcatcgcaacactctgtgaaagcctagacaccttagat
gaaccagaggctaaggcatcaatgatttggattattggagaatatgctgaaagaattgac
aatgctgatgaacttcttgagagcttcttggaaacgttcccagaagaaccagcattagtt
caattacagttactaacggcaactgttaagttgttccttaaaaagccaactgaagggcct
caacagatgatacaggctgttctcaataatgcaacagttgaaacagacaatcctgatttg
cgcgaccgagcttatatatactggcgacttctttctactgatcctgaggcagctaaagat
gtagttttggcagagaaacctgtgatcagcgatgattccaaccagcttgattcttctctc
ctagatgatctgctatccaatatttctaccctttcatcagtttatcacaagcctccagaa
gcatttgttagccgcgttaaaacagctcctagggctgatgatgaggagtttgctgataca
gctgaaacaggatattcagagtcaccatctcagggtgttgatggggcatcaccttcctct
agtgctggcacttcttctaatgttccagtgaagcagccagcagcaccagctgctcctgct
ccaatgccagacctccttggtgatttgatgggtatggataattccattgttcctgttgat
gaaccaacagcaccttcaggacctccactacctgttttgttgccatcaaccactggccaa
ggactgcagatcagcgcacaactagtgcggcgtgatggccaaatattctatgatatatct
tttgataatggcactcaaactgtgctagatggattcatgattcagtttaacaaaaatacc
tttggccttgcagccggtggtgcacttcaggtctctccactgcaacctgggacctctgcc
aggacgctgctacctatggtggcattccagaatctctctcctggagcaccaagctcactg
ctgcaggttgcggtgaagaataatcagcaacctgtgtggtacttcaatgacaaaatccct
atgcatgccttctttggtgaagatggcaaaatggaacgaacaagttttcttgaggcctgg
aaatctttacctgatgataatgaattttcgaaagagttcccctcttctgtcatcagcagc
gtagatgcaaccgttgagcaccttgcagcatcaaatgtgttctttattgccaagaggaaa
aactcaaacaaggatgttctttacatgtctgcaaagattccgcgtggaatccccttcctg
atagagcttactgctgcggtcggtgttcctggcgtgaagtgtgcggtcaaaactccaaat
aaggagatggtggctctcttcttcgaagccatggagtctcttctcaagtga
DBGET
integrated database retrieval system