Oryza glaberrima (African rice): 127765932
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Entry
127765932 CDS
T08853
Name
(RefSeq) RNA-binding protein Y14B
KO
K12876
RNA-binding protein 8A
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
ogl03015
mRNA surveillance pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127765932
09122 Translation
03013 Nucleocytoplasmic transport
127765932
03015 mRNA surveillance pathway
127765932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127765932
03041 Spliceosome [BR:
ogl03041
]
127765932
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127765932
Spliceosome [BR:
ogl03041
]
Complex C
Other components
EJC/TREX
127765932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
127765932
NCBI-ProteinID:
XP_052146868
UniProt:
I1PGL3
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All DBs
Position
3:33188922..33193763
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AA seq
197 aa
AA seq
DB search
MAAAAEDVEFVDYDRDEEEEEDAMDEDDRGGGRGGRALPVPHIVSQGVMRSRGRLLGRST
SVLASNRDRFDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYNTFSDFGHVKDLH
LNLGRRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPIQKLTSTRP
LHRRSRTPPRRLAALTC
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggaggacgtggagttcgtcgactacgaccgcgacgaggaggaggag
gaggacgccatggacgaggacgatcggggcggtggccgcggcgggcgcgcgctccccgta
ccccacatcgtctcccagggcgtgatgcgctcgcgcggccgcctcctcggccgcagcacc
tccgtgctcgcctccaaccgcgaccgcttcgactccctcgccgatgccggcaaccccggc
cacggcccacagcgctctattgaaggatggatactactggtctctggagtcaaagaagac
gcggaagaagatgatctgtacaacactttcagtgattttggtcatgttaaggacctacat
ttaaatctgggacgccgcactggatatgccaagggatatgcattagttgaatatgaaagt
tttgaggaagcacaaactgcaatcaaagcaatgaatgggactcagctgttaacaaggact
gtctatgttgactgggcattcagcagaggtcctatacagaaactcaccagtacaaggcca
ttacatcggcgatctcggactccacctcgcaggcttgctgccttgacatgttga
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