KEGG   Oryza glaberrima (African rice): 127765932
Entry
127765932         CDS       T08853                                 
Name
(RefSeq) RNA-binding protein Y14B
  KO
K12876  RNA-binding protein 8A
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03013  Nucleocytoplasmic transport
ogl03015  mRNA surveillance pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127765932
  09122 Translation
   03013 Nucleocytoplasmic transport
    127765932
   03015 mRNA surveillance pathway
    127765932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127765932
   03041 Spliceosome [BR:ogl03041]
    127765932
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127765932
Spliceosome [BR:ogl03041]
 Complex C
  Other components
   EJC/TREX
    127765932
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 127765932
NCBI-ProteinID: XP_052146868
UniProt: I1PGL3
LinkDB
Position
3:33188922..33193763
AA seq 197 aa
MAAAAEDVEFVDYDRDEEEEEDAMDEDDRGGGRGGRALPVPHIVSQGVMRSRGRLLGRST
SVLASNRDRFDSLADAGNPGHGPQRSIEGWILLVSGVKEDAEEDDLYNTFSDFGHVKDLH
LNLGRRTGYAKGYALVEYESFEEAQTAIKAMNGTQLLTRTVYVDWAFSRGPIQKLTSTRP
LHRRSRTPPRRLAALTC
NT seq 594 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggaggacgtggagttcgtcgactacgaccgcgacgaggaggaggag
gaggacgccatggacgaggacgatcggggcggtggccgcggcgggcgcgcgctccccgta
ccccacatcgtctcccagggcgtgatgcgctcgcgcggccgcctcctcggccgcagcacc
tccgtgctcgcctccaaccgcgaccgcttcgactccctcgccgatgccggcaaccccggc
cacggcccacagcgctctattgaaggatggatactactggtctctggagtcaaagaagac
gcggaagaagatgatctgtacaacactttcagtgattttggtcatgttaaggacctacat
ttaaatctgggacgccgcactggatatgccaagggatatgcattagttgaatatgaaagt
tttgaggaagcacaaactgcaatcaaagcaatgaatgggactcagctgttaacaaggact
gtctatgttgactgggcattcagcagaggtcctatacagaaactcaccagtacaaggcca
ttacatcggcgatctcggactccacctcgcaggcttgctgccttgacatgttga

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