Oryza glaberrima (African rice): 127766105
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Entry
127766105 CDS
T08853
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127766105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127766105
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127766105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
127766105
NCBI-ProteinID:
XP_052147110
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All DBs
Position
3:complement(14776666..14780326)
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AA seq
243 aa
AA seq
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MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDKLDGESKEKYIYFVLGLVYRDNSHTSVFHREIFLFFISGTGRTVD
GRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSPSPKRRYRADYRDRGYRDDYRDRH
YRDDYQDREYRRSRSIERYERERYQEKGYRRRSRSISPDYDRRHRKNGRPRDERSPRSRS
PST
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcctcggccgctacggcccaccggcggtccgcgactcctactccctcctcgtc
ctcaacgtctccttccgcacgacggccgacgacctcctcgcgctcttcgaccgctgcggc
gaggtcctcgacatccgcatcccccgcgaccgcaggactggggattcgagagggttcgcg
ttcgtgaggtacaagtacgaggacgaggcgcagaaggccgtcgataagctcgacggtgag
tctaaggaaaaatatatatattttgtactaggtttggtttaccgagataattctcatact
agtgtgtttcaccgtgaaattttcctcttttttatttcgggtacagggaggacggtggat
gggagggatatcatggtgcagttcgccaagtacggcccaaatgctgaaagaattcataag
gggaggattgtagaagagatttcgaagccaagaggccgatccagaagtcctagtccaaaa
cggaggtatcgtgctgactaccgagacaggggctaccgtgatgactatcgggacagacac
tatcgtgatgactatcaggacagggagtataggagaagccgaagcatagagaggtatgaa
cgtgagaggtatcaagaaaaaggctatcgtcgcaggagccggagcattagccctgattat
gacaggaggcatcgcaagaatggcaggcccagggatgaacgttctccacgttctcgaagc
ccttcgacctag
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