Oryza glaberrima (African rice): 127766137
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Entry
127766137 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127766137
KO
K12874
intron-binding protein aquarius
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127766137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127766137
Spliceosome [BR:
ogl03041
]
Complex B
Other components
Prp19-related factors
127766137
Complex C
127766137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD-helicase
UvrD_C_2
ResIII
AAA_22
SLFN-g3_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
127766137
NCBI-ProteinID:
XP_052147161
LinkDB
All DBs
Position
3:14699600..14709053
Genome browser
AA seq
1572 aa
AA seq
DB search
MPKVYGTGVFEFRHPRAAEYPLPADVPASAASAPDKAIPTAAASTITLLDIQRDRLTRVA
AEHWGAPTAGAAFDAALVREIYATELRVEGRGRKTVPLHRVMILEVSQYLENYLWPNFDP
AGASFEHVMSMILMVNEKFRENVAAWTCFHDRKDAFKGFLWRVLKLKEEDRELNMAEKTN
YLLFMINAFQSLEDELVRETILQLVSLKLWHTLSFGRLQMELCLNPELIKKWTKIKRKEA
KEAKKAGQTCDASEMLENRFLRNLIEEFLEILDSKVILSSQDGGDESVLNVSLSGQVDDS
CVLYCERFMEFLIDMLSQLPTRRFLRPLVADVAVVAKCHLSALYTHEKGRLFAQLVDLLQ
FYEGFEINDHSGTQLSDDDVLQAHYSRFQAFQLLAFKQVPKLRDFSLCNIGSIHKRADLA
KKLLVLTDVELQDLVCNKLKLISEEDPCSGRRDFLIEVLVAFFEKRQSQKDAVNALPLYP
NEQIMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEA
VPHLHAYINNEGDTAFRGWSRMAVPIKEFRITEVKQPNIGEVKPSAVTADVTFSISSYKP
QIKSEWDALKEHDVLFLLSIRPSFEPLSPEEAAKSTVPERLGLQCVRGCEVIEIRDEEGS
LMNDFTGRIKREEWKPPKGEIRTVKIALDTAQYHIDVTEVAEKGAENVYGTFNILMRRKP
KENNFKAILESIRDLMNETCVVPEWLHNIFLGYGNPSAAQWINMPDLLENIDFKDTFLDA
DHVVQSFPDYQVTFINSDGTENLNPSPPFKIKLSKKMRESSHALPGNVNSVLSAKNNMVD
DDGPQKEKIMVETYIPADPGPYPQDKPKQNSVRFTPTQIGAIISGIQPGLTMVVGPPGTG
KTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELAT
DLDFSRQGRVNAMLVRRLELLGEVAKLASSLHLPEDVSYTCETAAYFWLLHVYARWEQFL
AACAQNQDKPSFVKDRFPFSEFFSDTPQPTFTGESFEKDMHAAKGCFKHLLTIFQELEEC
RAFELLKSTAERANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIE
TFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGVPYI
ELNAQGRARPSIAELYNWRYRELGDLPYVREESIFHKANSGFSYDYQLVDVPDFRGRGES
APSPWFYQNEGEAEFIVSVYIYMRLIGYPANKISILTTYNGQKLLIRDVINRRCKPWNIE
PPSKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLIVAMSRARLGLYVFCRRSLFEQ
CYELQPTFQLLLQRPDKLGLNLEECTPFTERPLEETGNIHYVAGIEDIGHLVNFRLEHLR
QMQYMQYYAPHANVPPSAVPENNADATENGNAGNGMHKANDGMAEENGDAVMRNKMEEDT
IDTMQEENKMDGKNPEANDMAMEEKTVDGDDDPKNKMEEGNTEAKNKMEEGNTEAKDKME
EENDEAKNNMEE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggtctacggcaccggcgtcttcgagttccgccacccgcgcgccgccgagtac
ccgctcccggccgacgtcccggcctccgccgcgtcggcgcccgacaaggccatccccacc
gccgcggcctccaccatcacgctcctcgacatccagcgcgaccgcctcacccgcgtcgcc
gccgagcactggggcgcgcccaccgcgggggccgccttcgacgccgccctcgtcagggag
atctacgcgaccgagctccgggtcgagggccgcggccgcaagaccgtcccgctccaccgc
gtcatgatcctcgaggtcagccagtacctcgagaactacctctggccaaacttcgacccg
gccggcgcctccttcgagcacgtcatgtccatgatcctcatggtcaacgagaagttccgg
gagaatgtggcggcgtggacctgcttccatgaccggaaggatgctttcaagggattttta
tggcgggttctcaagctaaaggaagaggatagggagcttaatatggccgagaaaacaaac
tacctgttgttcatgataaatgcgtttcagagtttggaggatgaactagttcgagaaacc
atacttcagttagtaagcctaaagttgtggcatactctttcttttggacggcttcagatg
gagctttgccttaaccctgaattgattaagaagtggaccaaaatcaaaagaaaagaagct
aaagaagcaaaaaaggcaggtcaaacctgtgatgcttcagaaatgctcgagaatagattc
cttaggaacttaatagaagaattcctggagattcttgattcgaaggtaatattgtccagt
caagatggtggggatgaatctgtgttgaatgtatcactcagtgggcaggttgatgattct
tgtgtcttgtactgtgagagattcatggagtttttgattgatatgttgagccagcttcct
actagacgatttttaaggccccttgttgccgatgtagctgttgttgctaagtgtcactta
agtgcactgtatacccatgaaaaggggcgtctttttgcgcagttggttgatttgctgcag
ttttatgaaggctttgagattaatgatcattctggaacacagctcagtgatgatgatgtc
ttgcaagctcattattcccgtttccaagcctttcagctgctggccttcaaacaagtgcct
aagttgagagatttttccttgtgtaatattggttcaatccataagcgtgcggacttagca
aagaagctgcttgtcttgacagatgtagaactgcaagatctggtttgtaataagctcaag
ttaatttcagaggaggacccatgcagtggaagacgtgattttcttattgaggtcctggtt
gccttttttgagaagcgtcagtcacagaaagatgcagtaaatgcacttcctctttatcca
aatgaacagatcatgtgggatgaaagccttgttcctagcattaattattctggagagggc
tgccttgctctaccaaaactcaatctccagtttttaacacttcatgattatttattgagg
aatttcaatcttttccgccttgaatcaacatatgaaattcgtgaagacatccaggaagct
gttcctcatctgcatgcctatattaacaatgagggagacactgcctttcgtggttggtcc
aggatggctgttccaatcaaggaatttaggattactgaagtgaagcagccaaacattgga
gaagttaagccatctgctgtaactgctgatgtcactttcagcatctcaagctacaagcca
cagatcaaatctgaatgggatgctttgaaggaacatgatgttttatttttgttgtcgatc
cgtccatcttttgaaccccttagccctgaggaggctgcaaaatcaactgtgccagaaagg
cttggattacaatgtgtacgtggatgtgaggttattgaaattcgtgatgaggaaggatct
cttatgaatgattttacagggaggataaagagagaggaatggaaacctcccaagggtgag
attcgtactgttaaaattgctttggatacagctcagtatcatattgatgttactgaggta
gcagagaagggtgcagagaatgtgtatgggacatttaacattctaatgagaaggaaaccc
aaggagaataatttcaaagcgatattggaatctatacgtgatctaatgaatgaaacatgt
gtagttcctgaatggttgcataacatattcttgggttatgggaacccttctgccgcacag
tggataaatatgcctgatcttctggaaaatatagattttaaggacacttttcttgatgcg
gaccatgttgtacaaagctttccagattaccaggtcacatttatcaattcagatggaaca
gaaaacctgaatccgagccctccttttaagattaagttgtccaagaaaatgagggaaagt
agtcatgctctacctggcaatgtaaactctgttttgtcggctaagaacaatatggttgat
gatgatgggccccagaaagaaaaaataatggttgagacttatattcctgctgatccaggg
ccgtatcctcaagataaacctaaacagaactcagtgaggtttacacctactcagattggt
gctataatatctggtattcaacctgggttgacaatggttgttggtcctcctggtacggga
aaaacagatacagctgtgcagatattgaatgttttatatcacaactgtccttcccaaaga
actctaattataactcattccaatcaagctttgaatgatttgtttgagaagataatgcag
agagatgtgcctgctaggtaccttcttcgtcttggtcagggtgaacaagagttggcaact
gatctcgattttagccgtcaaggtcgtgtcaatgctatgctggttcggcgattagagctg
ctaggtgaagttgcaaaattggcaagttcccttcatcttcctgaagatgtgagctacaca
tgtgaaacggctgcgtacttttggttattacatgtttatgctcggtgggaacaattttta
gctgcctgtgcgcaaaaccaagacaagccctcatttgttaaagaccgcttccctttctca
gagttcttctcagatactccacaacctaccttcactggtgagtcctttgagaaagatatg
catgcagccaaaggttgtttcaaacatcttttgacaatatttcaagagctggaagaatgt
agggcttttgagctacttaagtcaacagcagagagggcaaattatctaatgaccaaacaa
gccaagattgttgccatgacttgtactcatgcggcattgaagaggagagactttcttcag
ttagggttcaaatacgataatttgctgatggaagaaagtgcacagatattagagatagag
actttcataccgatgctgctgcaacggcaggaagatggctatgctcgtctgaaacgttgc
attttaattggtgatcaccatcagttaccccctgtcgtgaagaacatggcttttcagaag
tacagccacatggaccaaagtctctttacaagatttgttcgtcttggtgtcccttacatt
gagctcaatgctcaggggcgtgccagacctagcatcgccgaactatataactggagatac
agagaacttggagatctaccttacgtccgtgaggagtctatcttccacaaagctaattct
ggcttctcttatgactatcagttggttgatgttcctgatttccgtggcagaggtgagtct
gccccttctccttggttctaccagaatgaaggggaggctgagtttatagttagtgtctac
atctacatgcgcctgattggataccctgccaataagatttcgatattgaccacttacaat
ggtcagaagcttcttattcgcgatgttattaacagaagatgcaagccatggaatatcgaa
ccacctagcaaggttaccacagtggacaagttccagggtcaacaaaatgatttcatttta
ttatctcttgtccgcacccgttttgtggggcatcttcgtgatgtcagaagacttattgtg
gcaatgtcccgtgctcgtctgggcctgtatgtgttctgccgtcgttcactttttgaacag
tgctacgaattgcagccaacattccagcttctcctccagaggcctgataagcttggcttg
aatcttgaagagtgcacaccatttacagagcgacctttagaggaaactggaaatattcat
tatgttgctggtattgaagatattggtcatctagtgaatttcagattagaacatcttcgt
cagatgcaatacatgcaatattatgcacctcatgcaaatgtaccaccttcagcagtacca
gaaaacaatgctgatgcaactgaaaatggcaatgctggcaatggtatgcataaggcaaac
gatggcatggctgaagaaaatggtgatgcagtgatgagaaataagatggaggaagacact
attgatacaatgcaggaagaaaacaagatggatggtaaaaatcctgaggcaaacgacatg
gctatggaggagaagaccgtcgacggagatgatgatccaaagaataagatggaggaagga
aatactgaggcaaagaataagatggaggaaggaaatactgaggcaaaggacaagatggag
gaagaaaatgatgaggcaaagaacaatatggaagagtga
DBGET
integrated database retrieval system
