Oryza glaberrima (African rice): 127766287
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Entry
127766287 CDS
T08853
Name
(RefSeq) transcription factor TCP21-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127766287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127766287
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Other transcription factors
TCP
127766287
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Gene cluster
GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
127766287
NCBI-ProteinID:
XP_052147333
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All DBs
Position
3:16931640..16933930
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AA seq
226 aa
AA seq
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MPCHIHGGVALDKQLVPTASKANGTALAVRKPPSKDRHSKVDGRGRRVRMPIICAARVFQ
LTRKLGLKSDGQTIEWLLREAEPSIIGATGTGTTLASSSPRPPHFILGKRLRVADDHTTS
PSPTLASDAPVQGFWVLPAGADFGQFWSFAAVREMMAAAAAPAMLGEAFAASVGNYLCCG
ACSPLATSPHLLAVPVAVPLPFPIPHRPSPISPVPSSRREALEAVI
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtcatatccatggcggcgtcgctctggacaagcaactcgtccccaccgcctcc
aaagccaatggcaccgccctcgctgtccgcaagcctccctccaaggaccgccatagcaag
gtcgacggccgcggccgccgcgtccgcatgcccatcatctgcgctgcccgtgttttccag
ctcacccgcaagcttggcctaaagtccgacggccagactatcgagtggctcctccgcgag
gctgagccatccatcattggcgccactggcaccggcaccaccctagcctcctcctcccca
cgccccccccacttcatcctcggcaagcgcctccgtgtcgccgacgaccacaccacctcc
ccctcgcccactctcgcttctgacgcccccgtccaaggcttctgggtgctccccgcaggg
gctgacttcggccaattttggagcttcgcggccgtgcgggagatgatggccgccgccgcg
gcgcccgccatgcttggggaggccttcgccgccagtgttggcaactacctctgttgcggc
gcctgctcacccctcgccacgtccccccatctcctcgccgtccccgtcgccgtgcctctc
cccttccccatcccccaccggccttctcccatttctcccgttccttcctcccgtcgcgag
gcactcgaggcagtgatttga
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