Oryza glaberrima (African rice): 127766416
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Entry
127766416 CDS
T08853
Name
(RefSeq) myosin-12-like isoform X1
KO
K10357
myosin V
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127766416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127766416
04131 Membrane trafficking [BR:
ogl04131
]
127766416
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127766416
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogl04812
]
127766416
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127766416
mRNA cycle factors
P-body specific factors
127766416
Membrane trafficking [BR:
ogl04131
]
Others
Actin-binding proteins
Myosins
127766416
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127766416
Cytoskeleton proteins [BR:
ogl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127766416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
AAA_16
nSTAND3
AAA_22
AAA_6
TSC22
Motif
Other DBs
NCBI-GeneID:
127766416
NCBI-ProteinID:
XP_052147417
LinkDB
All DBs
Position
3:30231384..30241825
Genome browser
AA seq
1564 aa
AA seq
DB search
MGTPVNIIVGSHVWAEDPDDAWIDGEVVEIRGGDATIVSTDGKTIVASLASIYPKDTEAP
PAGVDDMTKLAYLHEPGVLHNLACRYGINEIYTYTGNILIAVNPFRRLPHLYDVHMMEQY
KGAAFGELSPHLFAIADACYRAMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKYGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCSAPPEDVKKFKVGDPRSFHYLNQTNCYEVANVDDAREYL
ETRNAMDVVGIGQEEQDAIFRVVAAILHLGNINFSKGQEIDSSKLRDEKSVYHLKIVAEL
LMCDEKALQDSLCERVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINNSI
GQDPDATNIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEDYTREEID
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKL
ARTAFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNSSRCPFVANLFPPLPEETSKQS
KFSSIGTRFKQQLQALMETLSTTEPHYIRCVKPNAVLKPGIFENFNVLNQLRCGGVLEAI
RISCAGYPTKRTFDEFIDRFGMLAAELVDSSDEKAACAAICDKMGLKGYQIGKTKVFLRA
GQMAELDARRAEVLANAARLIQRRIKTHLTRKEFINLRKASIQSQKFWRARLARIFFEHM
RRNAASIRIQKHARTHSARKSYLQMYESAIVIQTGLRAMAACNEHRFRRETKASIIIQTR
WRQHKAYVDYKKQKRATLILQCLWRARIARKELRKLKMEARETGALKEAKDKLEKRVEEL
TWRLDVEKHLRIDLEEARGQEISNLKSVLQEMQEKLSEAHAAIEKEKEDAKLAIEQAPPK
IVEVPVVDNAKVELLTSQNKELEDELVTFRTKAEDLEKRLLEVQKESDELSREILEKDSK
LNQLQEMIERLETNLSSLESENQVLRQQSLLASADDDKSKQIESLESKIAILESENQLLR
SKSSVAVQAVITPEVIQPSAMEGLVNGYQLEEHKILIEEVVVPPIKNLSKQKSLTDRQQE
NHDVLIKSLAEDRRFDNGRPAAACIVYKSLLHWHSFEAEKTNIFDRIIHTIRSSIEHAES
STELAYWLSTTSTLLYLLQNTLKSSSSAGKGLNRSRTTTGNLFSRMVQNARSSSLGSGIS
SGYSGMVGRPDTASKVEAKYPALRFKQQLTAYVEKIYGMIRDNLKKEINPFLIMCIQAPR
AVRVRSSRGSLKSVHSNSLSRKTSSVHWQSIIKCLNHTLETMNNNHVPPMIIRKTFNQAF
AFMNVQLFNSLLLRRECCSFSNGEFLKAGLQELEQWCSVTTEEYAGTSWDEFQHIRQAVG
FLVLHQKTHKTLEEITDELCPVLSITQIYRIGTMFWDDKYGAQGLSQEVIGKMRTMATDD
SITTPNSSFLLDDDSSIPISLDDIARLMLDIDLSDVEPTPLLRQNSQFHFLLQHHATQTD
GIVC
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggggacgccggtgaacatcatcgtcgggtcgcatgtctgggcggaggaccccgacgac
gcgtggatcgacggggaggtcgtcgagatcaggggcggcgacgccaccatcgtcagcacc
gatggcaaaacgattgtggcgagcctcgcaagcatttaccccaaggatacggaagcgcca
cctgcaggagttgacgacatgacgaagctggcttacctccatgaacctggagtcttgcat
aacctcgcttgtcggtacggtattaacgagatatatacatacaccggcaatatcttgatt
gcagtcaaccctttccggaggctgcctcatctgtatgacgtgcacatgatggagcagtac
aaaggtgctgcatttggggagctcagccctcatctgtttgcgatcgcagatgcttgttac
agggcaatgatcaatgaacaagggagccaatcgatattggtgagcggtgagagtggtgct
ggtaagacagagacgaccaagatgctcatgaggtatcttgcattcatgggaggaaggtct
ggaacagagggtcggactgttgaacagcaggttttagagtctaatccagtactggaagca
tttggaaatgcgaagacggtgaagaacaacaactcgagtcgattcggtaagtttgttgaa
atccaattcgacaaatatgggaagatatccggggctgctgttcgaacatacctccttgaa
agatcgcgagtatgtcaggtctctgatcctgaaaggaactaccattgcttttacatgcta
tgttctgcaccaccagaggatgtgaaaaagtttaaggtgggagacccaagatcattccat
tatttgaaccaaacaaactgctatgaagtagctaatgtggatgacgcaagagaataccta
gaaacaagaaatgctatggatgttgttggcattggtcaagaagagcaggatgcaatcttt
agagtagtagctgcaatccttcatctaggaaacatcaatttctcgaaggggcaagaaatt
gattcatcgaagctgagggatgagaaatcagtctatcacctgaaaatagtagcagaactt
ctaatgtgtgatgaaaaggctcttcaagattcactttgtgagcgtgttattgtaacacct
gatggaaatatcacaaagccacttgatccagattctgcagcactgagtcgtgacgcctta
gcaaagactgtgtattcacgactgtttgactggattgtggacaagattaacaactcaatc
ggtcaagatccagatgcaactaatattataggagtacttgatatatatggatttgagagt
ttcaagattaacagcttcgaacaactatgtatcaacttgacaaacgagaagttgcagcag
cactttaaccagcatgtattcaagatggagcaagaagactatacaagagaggaaatagat
tggagctatgtggaatttgtggacaatcaagatgtgctggacttaattgagaaaaaacct
ggaggaataattgcactactggatgaagcatgcatgtttccaaagtccacacatgaaaca
tttgcccaaaagatgtatcaaacatacaaggcacataagcgcttcagcaaacccaaactt
gctcggacagcctttacaatcaaccactatgcaggagatgtcacatatcaagctgatcag
tttcttgacaagaacaaagactatgtggtggcagaacatcaggctctacttaactcctca
aggtgcccttttgttgcaaatctctttcctccattacctgaggaaacctctaaacagtcc
aaattctcttccatcggtactcgctttaagcaacaactacaagctctcatggaaacactg
agtacgacagaaccacactacattagatgtgtgaaacccaatgctgtacttaaaccagga
atctttgagaatttcaatgtcctgaaccaattgagatgcgggggtgttctggaagcaatc
cggatcagttgtgctggctatccaacaaaaaggacatttgatgagttcattgatcggttt
ggaatgcttgcagcagagcttgtcgacagctctgatgagaaggctgcctgtgcagcaata
tgtgataaaatgggtttgaagggatatcagataggaaaaacaaaggtattcctaagagct
ggtcagatggcagagctggatgctcgaagagcagaagtattggccaatgctgcacggctt
atccagagacgtataaagacacatcttacaagaaaggaattcatcaacttaagaaaagcc
tcaattcagtctcagaagttttggagggcacgcctagctagaatatttttcgagcatatg
agaagaaatgctgcttcaatcaggatacagaagcatgcacgtactcattcagccaggaaa
tcttaccttcaaatgtatgagtcagccatagtaatacagacaggattacgtgcaatggcg
gcttgcaatgaacacagattcagacgagagaccaaagcttccataataatccagactcga
tggcgccaacacaaagcttatgttgattacaaaaagcaaaaaagagctactttgattctt
cagtgcctgtggagagcacgtattgcaagaaaggaacttcggaagctcaaaatggaagca
agagagactggcgcactgaaagaagcaaaagacaaacttgaaaaaagagttgaggaactc
acatggcgattagatgttgagaaacacttgaggattgaccttgaagaagccagggggcaa
gagatttcaaacttgaaatctgtgttgcaagaaatgcaagaaaagctttcggaagcacat
gcagcaatagaaaaggagaaagaagatgcaaaactagcaattgaacaggcaccaccaaag
atagtagaggtgccggtggtggacaatgcaaaagttgagctgctgactagtcaaaataag
gaacttgaggatgaacttgttacatttagaacaaaggctgaagatctagaaaagagactt
ctagaggttcaaaaggagtccgatgaattgtcgagggaaattctagaaaaggactccaaa
cttaatcaacttcaggagatgatagaaaggcttgaaacaaatttatccagcttggaatct
gaaaaccaggtcctacgtcaacaatcactacttgcatctgcagatgacgataaatcaaag
caaatagagagtctggaaagcaagattgccatcttggagtcagaaaaccagttgctccgc
agtaaatcttctgtagctgttcaagcagtaattactcctgaagtgattcagccatcagca
atggagggccttgtgaatggatatcagcttgaagaacataaaatcctcattgaggaggtg
gttgttcctcctataaagaatttaagcaaacaaaagtcgctcacggatcgacaacaagaa
aatcatgatgtcctgatcaaaagtctggctgaagacaggagatttgacaacggcagacca
gctgcagcatgcatcgtgtacaaatcactcctgcactggcactcatttgaagcagagaag
actaacatatttgaccgaatcatccatacaattaggtcatcaattgagcacgctgaaagt
tctacagaactggcttattggctgtcaactacatcaactcttctctacctattacaaaat
actcttaagtctagcagttcagcaggtaaaggattaaatcgcagccgaaccacaacaggc
aacctgttcagtaggatggtgcagaatgctcgatcgtcgtcattaggatcaggcatatca
agtggatatagtggaatggttggaaggcctgacactgcatcaaaggtagaggcaaaatac
ccagcactacgtttcaaacagcaattaacagcatatgtcgagaagatatatggaatgatc
agagataacctgaagaaggaaataaacccgttcttgattatgtgcatacaggctccaaga
gctgttcgtgtgagatcatccaggggatcgttgaaaagtgtacattctaattcactatca
aggaaaacatcaagtgtgcattggcaaagcatcattaagtgcctgaaccatacactcgaa
acaatgaacaataatcacgtacctccaatgataatcaggaaaacattcaatcaagcattt
gcctttatgaacgttcaactcttcaatagtttgctactccgtcgagaatgctgctccttt
agcaatggggaattcttaaaggctggtttacaagaattagagcagtggtgctctgtaaca
actgaagagtatgcaggaacgtcttgggatgaatttcagcacatcagacaggcagttgga
tttctggttttgcatcagaagacacataaaaccttggaggaaatcactgatgagctttgc
ccagttttgagcatcactcaaatatatcgcattggaacaatgttctgggatgataaatac
ggtgcacaaggtctatctcaggaggtcattggaaagatgagaacaatggccactgatgac
tcaataactactccaaatagttcgttcttgttagatgacgactcaagcatacctatatcg
ttggatgatatagcacgactgatgcttgacatagacctatctgacgtggaaccaacacca
ctgctcaggcagaactctcagttccactttctactgcagcaccacgccacacagactgat
ggcattgtttgttaa
DBGET
integrated database retrieval system
