Oryza glaberrima (African rice): 127766680
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Entry
127766680 CDS
T08853
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00730
Thiamine metabolism
ogl01100
Metabolic pathways
ogl01240
Biosynthesis of cofactors
Module
ogl_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
127766680
Enzymes [BR:
ogl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
127766680
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
127766680
NCBI-ProteinID:
XP_052147755
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Position
3:26431017..26438059
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AA seq
639 aa
AA seq
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MAALQPSFSSAMAMKSLKFPKTAVLPGFGGIARPQDVQDRSANFTCSRPRAASVTDQSTA
EPAKPRQNKHTVDPSAPEFLPLPSFEECFPRSTKESREIVHKESGHVLKIPFRRIHLTGD
EKHFDTYDTSGPQNISPRIGLPKIRKEWIDRREKLGGPRYTQMYYAKQGIITEEMLYCAT
RENLSPEFVRSEVARGRAIIPSNKRHLELEPMIVGRNFLVKVNANIGNSAVVSSIEEEVH
KLQWATMWGADTVMDLSTGRHIHETREWILRNSSVPIGTVPIYQALEKVNGIAENLSWEV
FRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKENFAYE
HWDEILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWAKDVQVMNEG
PGHIPMHKIPENMEKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLC
YVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKGHPYAQAWDDTLSKARFEFRWLDQFA
LSLDPVTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDIRKYADEHGYGTVEEAVI
QGMNAMSAEFSAARKTISGEQHGEAGGEIYVPESYTARK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctgcaaccctcattctcgtcagcaatggctatgaaaagtctgaagttcccc
aaaactgcagttttacctggatttggtggtattgcacgtcctcaagatgtgcaggacagg
agcgctaacttcacttgttcaaggcctagagcagcttcagtgactgaccagtcaacagca
gagccagcaaaacccaggcaaaacaagcacactgttgatccttctgctccagaatttctg
ccactcccatcatttgaagaatgctttcctaggagcacaaaagaatccagagaaattgtg
cacaaggaatctggccatgtcctcaagatcccatttaggagaatccatttgaccggagat
gagaagcattttgacacatacgacaccagtggtccacaaaacattagtccaaggattgga
cttccaaagataaggaaggaatggattgacaggagggagaagttaggtggtcctcgatac
acacaaatgtattacgctaagcagggaatcataacagaggagatgttgtactgtgccaca
cgtgagaaccttagtcctgaatttgtccggtcagaggttgcccgtggacgagctataatt
ccttccaacaagaggcacctggaattggaacccatgattgttggacgaaacttccttgta
aaagtgaatgcaaacattgggaattctgctgttgtgagctccatcgaggaggaagtacac
aagctccagtgggctacaatgtggggagctgatactgtcatggacctttcaacagggcgt
catatccatgagacccgggaatggatccttcgtaattcttcagtccctattgggacggtg
cctatttaccaagcacttgagaaagttaatggtattgctgaaaatctaagctgggaagtc
tttagagatactttaatcgaacaagctgagcagggtgttgattacttcacaatccatgct
ggcgtgcttcttcgttacattcctcttacggcaaagagaatgaccggcatagtttcacgt
ggtggctctatccatgcaaaatggtgcctaacatatcataaggagaactttgcctatgag
cactgggatgaaattcttgatatttgcaatcagtatgatgtggcattatccattggtgat
ggtttgagaccaggttctatttatgatgcaaatgatagtgctcagtttgcagaattgctg
actcaaggggaactcacacgccgagcttgggcaaaagatgtgcaggtaatgaatgaaggc
ccagggcacattccgatgcataaaattcctgaaaacatggagaagcaactggagtggtgc
aatgaagcacctttctacacactggggccactgacaactgatattgcacctggttatgat
cacatcacctccgccattggtgctgccaacattggggctcttggcactgcacttctctgt
tatgtaacaccaaaggagcaccttggattgcctaaccgtgatgatgttaagacaggcgtg
atatcgtacaaaattgctgctcatgctgctgatttggcaaagggccatccctatgcacaa
gcatgggacgatacactaagcaaggcaagatttgagtttagatggttggatcaatttgct
ctatctctggatcctgtgaccgctatgtctttccatgatgaaacattaccgtcggagggt
gccaaagtggcacatttctgctcaatgtgtggcccaaagttttgttcgatgaaaatcaca
gaggatattagaaaatatgctgatgaacatggttacgggacagtggaggaagcggtgata
caaggaatgaatgctatgagtgctgagttttcagctgcaaggaaaacaatcagtggggag
caacatggtgaagctggaggggagatatatgttccagaaagctatacagctcgcaaataa
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