Oryza glaberrima (African rice): 127766708
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Entry
127766708 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127766708
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127766708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127766708
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127766708
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
127766708
NCBI-ProteinID:
XP_052147790
UniProt:
I1PG54
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All DBs
Position
3:complement(31891309..31897180)
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AA seq
329 aa
AA seq
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MANLPPSLSIGAASFAAPSPPPPSPGASSSSSSAAAAPGAAKDRKMASAEQLVLDLCDPE
LRENALLDLSKKREIFQDLAPLLWHSYGTIAALLQEIVSIYPSLSPPTLSPGASNRVCNA
LALLQCVASHSDTRIPFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDSE
VIGFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVASVL
SQMVQALADQPSPRLLKHIIRCYLRLSENSRACTALNSCLPNALKDGTLNNFLQDDHVTR
RWLQQLLHNMTMAGMGGAPHGGLDHIMGM
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgccgccgtcgctctccatcggcgccgcctccttcgccgcgccctcgccc
ccgccgccctcgcctggtgcctcctcgtcgtcgtcgtcggcggcggcggctccgggggcc
gccaaggaccggaagatggcgtccgcggagcagctcgtgctcgacctctgcgaccccgag
ctgcgggagaacgccctcctcgacctctccaagaagcgagagatttttcaggatcttgct
ccactcctgtggcactcttatggaacaattgctgcactactccaggagattgtgtcaatc
tatccatcactttcacccccaacattatctccaggggcttcaaaccgtgtctgcaatgca
cttgcacttcttcagtgtgttgcctcacacagtgacacgaggattcctttcttgaatgct
cacatcccactgtatctgtaccctttcttgaatactactagcaagacaaggccttttgag
tacttgaggcttaccagcttgggtgtcattggcgcacttgtgaaggttgatgattctgaa
gtcattgggtttctgctgcaaactgaaataattcctctgtgtctccgtactatggagatg
ggcagtgaactttcaaaaacggttgccacctttattgttcaaaagattctgcttgatgat
gttgggcttcgctacatatgtgctactgctgaacgtttctttgccgtagccagtgttcta
tcacagatggttcaggcacttgctgatcaaccttctccaagactgctgaagcacataatt
cgctgctacctcaggctgtcagaaaattccagggcatgtaccgcgctgaacagctgcctc
cccaacgcgctgaaagatggaaccctcaacaacttcctccaggatgatcatgtcacaagg
cgttggctccagcagctgctgcacaacatgactatggccggcatgggaggagctcctcat
ggaggccttgatcacatcatggggatgtga
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