Oryza glaberrima (African rice): 127766734
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Entry
127766734 CDS
T08853
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127766734
Membrane trafficking [BR:
ogl04131
]
Protein recycling
Others
EARP complex
127766734
Endosome - Golgi transport
Tethering complex
GARP complex
127766734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
Vps54_N
DUF4543
COG2_N
Motif
Other DBs
NCBI-GeneID:
127766734
NCBI-ProteinID:
XP_052147821
LinkDB
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Position
3:29721293..29731048
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AA seq
769 aa
AA seq
DB search
MATAGGAAAAAPQAMDEKARRTRDLLASFYNTDPSAAAAAAAASSAARPSPTAASASPLD
TINSASFDPDVYMNVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDT
IKRMKTNIVGMEANMEQLLSKITSVQSRSDTVNTSLFDKRENIEKLHRTRNLLRKVQFIY
DLPTRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFHDCKKASEEAIDLVTQHLKTKLY
SDSEPIESRAEAVVLLKQLNFPVDSLKSNLLEKLEDCLLNFQKEPTQASIGDISKTFRAY
LIIFPDSEKRLIELAQALFSNRYETVRENLRKRIPSTDLLAMLRSLWEDATAIDEVIPEA
ALPAFSLETTRDIIRQHIATAFLHLQSEISDVLTRTPSTSNGKLEESQLQTAMETSKVKV
LQGCIDLLQEFHHLIDGNTELLVKLRDLVIDWVQEGFQDFFQKLDGHFHMLSGRSKSPSQ
EMESVQIDKVPTALVLMLAQLCVFIEQTAIPKVTEELASCFSGGGARSYEYGPPFVPGEI
CRLYRSSGEKFLHHYINMKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEFNGVV
SEVKQVLPGLIRRHRHSDSTGSTTSSRSNPMREDMLNRSNTHRARSQFLENHLAKLFEQK
MEIFTKVEYTQESVISAVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKTSLKEFVDD
EAAISFLLKEVNNAAHERCLDPIPLEPPILDKLISAKLAKIKEQSPNMQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgggggcgccgccgccgccgcgccgcaggcaatggacgagaaggcccgg
cgcacgcgcgacctcctcgcgagcttctacaacaccgacccgtccgccgctgcggccgcg
gccgcggcgtcctccgcggcgcggccatcccctaccgcggcctccgcgtcgccgctcgac
accatcaactcggcctccttcgatcccgacgtctacatgaacgtcctggtgcaacaatca
aatctggaagctcttttacagaggcatgtgaagatggccgctgagatcaagaatctggat
acagacttacaaatgctagtatatgagaattataacaagtttatcagcgcaactgacact
ataaaaaggatgaagactaacattgttggcatggaagcaaacatggagcagctcctttca
aaaataacatcagtgcaatcaagaagtgacacagtgaatacatctctttttgacaagagg
gaaaacatagagaaactacatcgtacacgcaatctcctccgaaaagttcaattcatatat
gacctgccgactcggcttaacaaatgcatcaagacagaagcatatgcggatgctgtcaga
ttttttactggagcaaaacctattttcgaggcttatggcgacacttcctttcatgactgt
aaaaaagcatctgaggaggcaattgatttagttacacagcacctgaagacaaaattatat
tcagattctgaacctattgaatcaagagcagaagctgtggtgcttcttaaacagctcaac
tttccggtggacagcctgaaatcaaacctacttgagaagttagaagattgcctcttaaat
ttccagaaggagcccacacaggcttcaattggtgatatttcaaagacattccgtgcttat
ctcataatatttcctgattcagaaaagcgcctcattgaacttgcacaggctttgttctca
aaccggtatgaaacggtcagagagaatctgaggaaaagaattccatcaacagatctattg
gctatgttacgatccttatgggaggacgccactgccattgatgaagttatacctgaggct
gcattaccagctttttctctggagactactcgggatattattagacaacatatcgcaact
gcctttcttcatcttcaaagtgaaatatcagatgtactcaccagaacaccctcgacatca
aatgggaagttagaagagtcacagctgcaaactgccatggaaacaagcaaggttaaagta
ttgcaaggatgtatagatctcctgcaggaatttcatcatcttatagatggcaatacagag
ttacttgtaaaactgagagatttggttattgattgggtacaagaaggttttcaagatttc
tttcagaaacttgatgggcattttcatatgctttctgggagaagcaagagtccatctcaa
gagatggaatcggtgcaaattgataaggttccaacggctttggtgcttatgcttgcacaa
ctttgtgttttcatagaacaaacagcaattcccaaagtcacagaggagttggcttcttgt
ttttctggaggtggtgcacgtagctatgaatatgggccaccttttgtgcctggagagata
tgccggctttatcgttcatctggggagaagttcttacatcattacataaatatgaagaca
cagaagatctccaaacttcttaataaacgatttacaactccagtctggataaagcacaag
gaaccgcgggaagtgaatatgtttgttgatctacttctcctagagttcaatggagtagtg
tctgaagtcaaacaggtattacctggtttgattcggcgacatcgacattctgatagcact
ggcagcacaacttcctcaagaagtaatccaatgagagaggacatgttgaaccgatcaaac
acacaccgtgccagaagtcaatttttagaaaatcatctagcaaaattatttgagcagaaa
atggaaatattcaccaaagttgaatacacacaggaatctgtaatttctgctgtcctcaag
ctctgcctgaaaagcttgcaagaatttgttcggcttcagacattcaacagaagtggattt
cagcaaattcagctggatatggaatttctcaagacatcccttaaggagtttgttgatgat
gaagcagctattagctttttacttaaagaggtgaacaatgctgctcacgagagatgtctt
gacccaatccctctcgagccgcccatattggataagctcatcagtgcaaaactagcaaag
attaaagagcaaagtccaaatatgcagtag
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