Oryza glaberrima (African rice): 127766749
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Entry
127766749 CDS
T08853
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127766749
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127766749
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127766749
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127766749
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127766749
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127766749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
UCH_1
MATH
RA_2
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
127766749
NCBI-ProteinID:
XP_052147847
UniProt:
I1NS12
LinkDB
All DBs
Position
1:complement(29929210..29945919)
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AA seq
1110 aa
AA seq
DB search
MTMVTPRAPELLQQDQDEEMLVPDQDVVVEGPQPMEDSGSTVENEQVPETSTSRFTWTIE
DFSNHRKLYSDVFVVGGHKWRVLVFPTGNSVQSLSMYLDIADANEQPHGWSKYAQFSLAV
INQLDSKYSLRKEAAHHFSTRESDWGFTSFMHLGDLYDPTKGYIVNDKCIIEAEVAVRKI
VDFWNYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDTPCGSIPL
ALQSLFCKLQHSDNSVSTKELTKSFGWDTVDSFLQHDVQELNRVLCEKLENKMKGTTVEG
TIQQLFEGHHMNYIECINVDYKSTRKESFYDLALDVKGCSDVYASFDKYVEVERLEGDNK
YQSEKHGLQDAKKGMLFIDFPPVLQLQLKRFEYDFVRDTMVKINDRYEFPLQLDLDKDDG
KYLSPEADRRVRNLYTLHSVLVHSGGGHGGHYYAFIRPALSDIWYKFDDERVTKEDMKRA
LEEQYGGEEELPHTNPGLNTTPLRFTKHSNAYMLVYIRESDREKVICNLDENDIPEHLKI
RLRKENEEREYKKKEKAEAHMFTALKVARDSDFAEQIGKHIYFDLVDYDNIQSLRAPKHL
TINQAKVDLSKEFGIPVQSQRFWLWAKRQNHTFRPVRPLTLQEEASSIGHLTDPSNKSLN
SELKLFLEVALGQENHPISVPPKTKDDILIFFKLYDPEKEELRYVGKLLVKASGKPADIV
QKLQEMAGFQSDEDIELYEEVMFEPSVMCEPININDSFLSSQLEDGDIICYQKRCSPEKL
DHYRCADVPSFFEYIQNRQVVHFRLLENPKDDYFTLELSKRFTYDDVVEKVANQLGLDDP
SKLRLTQHLPYSQMPKSHYIKYRGLDHLSDMLRNGNQMSDILYYEILDIPLPVLQDLITL
RVAFYHATNNEVSSHFIRLPKGSTMSDLIEDMKSKVELSYSDAEFRLFEVYKNKIRKVYQ
PSEKISVNEFNGLLCVEEVPEEEKNAGVRDRLVHVCHFIIEKQHIDYYGEPFFFLIRDDE
TLSDIKVRIQKKLLVSDEQFAKWKFAYIAHNRLAGEYFQDSDIVLSRFQKDVYGPWEQCL
GLEHSDVTPKRSCLSNQNRNSFDKAVKIFN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggtgaccccgcgcgcacccgagctcctgcagcaggaccaggatgaggagatg
ctggtgccagaccaggatgttgttgttgagggacctcagccgatggaagactctggatca
acagttgagaacgagcaggtaccagaaacctctacgtccagatttacgtggaccattgaa
gatttttcgaatcacagaaagctgtactctgatgtttttgtggttggggggcacaaatgg
agggtgttagtttttccaactggaaacagtgtacagtccctttcgatgtacctagatatt
gctgacgcaaatgaacagcctcatggatggagtaaatatgcacagttcagccttgctgtg
atcaaccagttagacagcaagtactcactaagaaaagaagcagcacatcatttcagtact
cgggaaagtgattggggcttcacttcttttatgcatttaggagatctatatgatccgact
aaaggttatattgtgaatgataaatgcattattgaggctgaggttgctgtgcgtaaaatt
gttgatttctggaattatgattccaaaaaggagactggctatgttggccttaagaatcaa
ggggctacatgctacatgaattctcttcttcagacgctttaccatattccgtacttccga
aaggctgtataccatatgccaactacagagaatgatacaccttgcgggagcatccctttg
gctttgcaaagtcttttctgcaaacttcagcatagtgacaatagtgtttctacaaaagag
cttaccaaatcttttggatgggataccgttgattctttcctgcagcatgatgttcaagaa
ctgaatcgtgttctctgcgaaaaactggaaaacaaaatgaagggaactactgtggaaggg
acaattcaacagctatttgaaggtcatcatatgaattatattgagtgcattaatgttgac
tacaaatctacaaggaaagaatcattctatgatcttgcacttgatgtcaagggctgttca
gatgtttatgcatcatttgataagtatgttgaagtagagagattggaaggtgataataaa
taccagtctgagaaacatggtttgcaggatgccaagaaagggatgctttttattgacttc
cctccagtcctgcaacttcaattaaagcggtttgaatatgattttgtgcgggataccatg
gttaagataaatgaccgctatgagttcccattacaattagatcttgacaaggatgatgga
aaatacctctctccagaagctgacaggagggtgcgtaacctctatactctacacagcgta
cttgttcatagtggtggtggtcatggtggacactactacgcctttatacgcccggcactt
tcagatatatggtacaagtttgatgatgaacgagtgacaaaagaagacatgaagcgggca
ttagaggagcaatacggtggcgaggaagagctcccacataccaatcctggattgaatacc
accccgcttaggtttactaagcattcaaatgcttacatgcttgtgtacattcgtgaaagt
gacagagaaaaagttatttgcaatttagatgaaaacgacataccagaacaccttaagatt
aggttgagaaaagaaaatgaagaaagagagtataagaaaaaggagaaagcagaggcccac
atgttcactgcattaaaggttgcccgagattctgattttgcagagcaaattggaaaacat
atatattttgatcttgtggattatgacaacatccaaagccttcgggcacctaaacatttg
acaataaaccaggccaaggtcgatttatcaaaagaatttggtattcctgtacaatcccaa
cgattttggttatgggctaagcgacagaaccacacatttagacccgtacgcccgttgact
ctccaggaggaagcatctagtattggacaccttacagatccatcaaataaatcactcaat
tctgagttgaaactgttcttggaggttgcattgggacaggaaaatcatcctatttctgtg
cctccaaagacaaaggatgacatattaatattcttcaagctgtatgatcctgaaaaggaa
gagctaagatatgttggaaaacttcttgtgaaagcatcagggaagccagctgatatagtg
caaaaattgcaagagatggcagggtttcagtcagatgaagatattgaactgtatgaggaa
gtaatgtttgagccaagtgtaatgtgtgaacctattaacattaatgattccttcctttca
agccagcttgaagatggtgacattatatgctaccaaaaacgttgttctccagaaaagttg
gatcactatcgctgtgccgatgtgccatctttctttgaatatatccaaaatagacaggtt
gtccacttcagattacttgagaatccaaaagatgattacttcactttggagctttcaaag
cgtttcacgtatgatgatgttgtcgagaaagttgctaatcaacttggactcgatgatcct
tccaaactccgccttacacaacacctcccgtattcacagatgcccaaatctcactacatt
aagtatagaggtcttgatcatctttcggacatgctaaggaatggcaatcagatgtctgac
atattgtattatgagatactggacatccctttgccagtactgcaagatctgataacattg
agagttgccttttatcatgctacaaacaatgaggtgtcatctcactttatacggttgcca
aaaggtagcactatgtctgatttgattgaggacatgaaatccaaggttgagttatcttat
agtgatgctgaattccggttatttgaggtctacaaaaacaagatacgcaaggtgtatcaa
ccttcggagaaaatttcagttaatgaattcaatggactgttatgtgttgaagaggttcct
gaagaagagaaaaatgctggtgtgcgagaccgtttggttcatgtctgtcacttcatcata
gaaaaacagcacattgattactacggagaacctttcttctttcttatccgtgatgatgag
acattatcagatatcaaagtgcgtattcagaagaaacttctggtttctgatgagcagttt
gcgaagtggaaatttgcttatattgctcacaatcgcctggctggtgaatactttcaagat
tcagatatcgtattgagccgattccagaaagatgtttatggaccatgggaacaatgctta
ggacttgagcactcagacgtcaccccaaaaaggtcatgcttgtccaatcagaaccgcaat
tctttcgataaggctgtgaagattttcaactag
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integrated database retrieval system
