Oryza glaberrima (African rice): 127766764
Help
Entry
127766764 CDS
T08853
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127766764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127766764
03036 Chromosome and associated proteins [BR:
ogl03036
]
127766764
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127766764
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127766764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
127766764
NCBI-ProteinID:
XP_052147863
LinkDB
All DBs
Position
3:6248109..6255702
Genome browser
AA seq
1290 aa
AA seq
DB search
MFSPAIKKPHLLHRRDKEEASPSPPPAPAHTPAPRGFAVHDRPATGTPAPWTSSSLLARI
STSTRTDRTGDSGQIQPVHVSEFPQIVRNAQANLLQKSFSGKNMLAGGIDKETSLAWMLC
GNELFIWSYLASVAKDCLVLEVPSSLMGNKEEKSLCGNQWAVCIVRWGSSGASTRSSGDI
LHRRSSTGFILCNKRTQAIAYWSDIYAESSKSPVLDLIGYGDTSSGDGTSGNCRINSLIA
VAVPGGINECIVIASQPTGTLWMFWCSPAAVRRREIHKGTLGVYNADHSQKNSGGRSLAW
LPSKASSKAAERTFFLLTSNELQCWSISFGHDINCKKIGSQEIVGSDGDMGIKKDIAGQK
NIWLLDMQIDDHGKEIIILVATFCKDRVSGSNYTQYSLLTMLYRPNQKFSSEDNVIKTER
FLEKKAPSQVIIPKARVEDEEFLFSMRLKTGGKPSGSVIILSGDGTATIAIYWRGSTRLY
QFDLPWDAGKVLDASVIPSSEDRDEGAWVVLTEKAGVWAVPEKAVLVGGVEPPERSLSRK
GSCNEAVAEEKRRNQAFNASVVPRRASSEAWSAGERQRPALTGIAQQAVVDEESEMLLNR
LFHDFVLSGTVHEALQKLRAAGAFDKEGEMNISVRISKSIVNTLSKHWTTTREAEFLAST
IVSSLTEKQQKHKKFLQFLVLSKCHEELSSKQRTAMLTVMEHGEKLSGMIQLRELQNALS
HQRSSINLSPQSKNQTTGALWNLIQLVGEQSRRNTVLLMDRDNAEVFYSRVSDIEDLFNC
ISHQLQYIITGEENPSVQMQRALELSNACMTLVQAALRYREEHKDWYPSPEGLITWNSQP
VVRSGIWRVASFVMELLREPGAADMSMKSNLWSQLERLTDILLDAYIGLLTAKFERGDEH
GVLIQEYCDRRDELLGSLYDLAKQIVDAKYQETTEVTDNLELKESIFREVTSPILATAKR
HEGYQTLWQICYDLSDTGLLRSLMHDSVGPHGGFSFFVFKQLVNRRQHAKLLRLGEEFPE
ELANFLKERDDLLWLHEICLNRFSSASKTLHTLVSPEEDANLTSNRKSLSFVERRRFLYL
SKIAAAAGKDVDYEVKVAHIDADIQILNLQEEIVQHDPEYAPDKYTTKPFRPLELIEMCL
KGDRELSLKAFEVFAWTRASFRSSNKGLLEACWMNAADQDDWVSLQEESSGGWSDEVIQE
SLQGTVLFNASRLCYSPDAVVYDGSFEDVLPVKKEDVHLRGLEGRCLSVEEVLMQHKDFP
DAGKLMMTAVIMGKELPYTVSTAEPVDMDS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccggcgatcaagaagccccacctgctccaccgcagggacaaggaggaggcg
tccccctcaccccctcccgctcccgcgcacacgcccgcgcctcgtggatttgccgtccac
gaccgccccgccaccggcaccccggcgccgtggacctcctcctccctgctcgccaggatt
tcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggtgcatgta
tccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagagtttttcc
ggcaagaacatgcttgctggtggcattgataaagaaacatcccttgcatggatgttatgt
ggaaatgagctttttatctggagttacctggcttctgttgcaaaagactgtcttgtactt
gaggtcccttcttctcttatggggaacaaagaagaaaaatctctatgtggtaatcagtgg
gcagtttgcatagtgagatggggtagtagtggtgcatcaacacggagcagtggagatata
ttgcatcgaagaagttcgactggttttatcctgtgcaacaaaagaacacaagctatagct
tattggtctgatatctatgctgaaagcagtaagagtccagttcttgatttaattggatat
ggtgatacatcttcaggtgatggcacatctggaaactgcaggattaattctcttattgca
gtggcagttccaggaggtattaatgaatgcattgtgattgcttctcagccaacaggcaca
ttatggatgttctggtgttcaccagctgcagttcgtcgaagagaaattcataagggtaca
ttaggagtttataatgctgatcattctcagaaaaatagtggtggaaggtccttggcttgg
ctaccaagtaaagcatcatctaaggctgctgaacggacgttctttttattgactagtaat
gagctgcaatgctggagcatctcattcgggcatgatatcaactgcaaaaaaatagggtct
caggaaattgttggtagtgatggtgatatgggaataaagaaagacatagctggacagaaa
aacatatggcttttggacatgcagatagatgatcatgggaaagaaattatcattcttgtt
gctaccttctgcaaagatcgggtgagtgggtcgaactacactcagtattctcttctgacg
atgctgtacagacctaaccaaaagttttcatctgaagataatgtgattaaaactgaaagg
tttttggagaaaaaagctccttctcaggtgataatccctaaggctagagtagaggatgaa
gagttcttgttttctatgaggctaaaaactggtggtaagccttctggttctgtaatcata
ctgtcaggtgatggaacagcaacaatagccatatactggagaggttcaacccgtctctat
caatttgatctgccttgggatgctggaaaggttctcgatgcttcagttatcccatcttcc
gaggacagagatgaaggagcttgggttgttcttacagaaaaggcaggagtgtgggcagtt
cctgagaaagctgtgttagttggtggggttgagccaccagagcggagcttgtcaagaaaa
ggaagttgcaatgaagcagttgctgaagagaaaagaagaaatcaggcattcaatgctagt
gttgtacccagaagagctagttctgaggcttggagtgctggggagaggcaaagaccagca
ttaactggtatagctcagcaggctgtggttgatgaggagtctgaaatgttattaaaccgg
ttatttcatgattttgttttgtccggtacagttcatgaagcacttcaaaagcttagagca
gcaggcgcatttgacaaagagggtgagatgaacatatctgttcgaataagcaaatccatc
gtaaacactctatctaagcattggacaacaactagagaagctgaatttcttgcttcaaca
attgtttcatccctaactgagaagcagcaaaaacacaagaaattccttcagtttcttgtc
ttgtctaagtgccatgaggaactctcttcaaagcaaagaactgcgatgctaactgtcatg
gagcatggagaaaagctctctggaatgatccagctcagagaattacaaaatgctcttagc
catcaacgctcaagcataaatttatcacctcagtcaaaaaaccaaacaactggtgcattg
tggaaccttattcaattggttggtgagcaatctcgaagaaacactgttctcttaatggac
cgtgataatgctgaagtgttctacagcagagtttcagatatagaagatctatttaattgc
atatctcatcagcttcaatacattataaccggagaagaaaacccttctgttcagatgcaa
cgtgcacttgagttatcaaatgcttgcatgaccctagttcaggcagcattgcgctacaga
gaggagcacaaggactggtatccttctcctgaaggactgataacatggaacagccagcct
gttgtacgatctggaatctggcgagtagcatcctttgtcatggagcttttgagagaacca
ggggctgcggacatgtcaatgaagtcaaacctatggtctcagttggaacgactcacagat
atcctactggatgcatatatcgggttgttaactgctaaattcgagcgtggggatgagcat
ggtgtgctaatccaagaatactgtgacagaagagatgaacttcttgggtccctctatgac
ctcgcaaaacaaattgtagatgcaaaatatcaggagacgacagaagtcactgacaatctg
gaactgaaagaatctatattcagagaagtcacttctccaattttggcaacagctaaacgg
catgaagggtaccaaacattgtggcagatttgctatgatctcagtgatacaggccttctt
cgcagtcttatgcatgatagtgtaggacctcacgggggattcagtttctttgttttcaaa
caactagtcaacaggcgtcaacatgctaagctattaagattaggtgaagaattcccggaa
gagctagccaattttctgaaagagcgggatgatcttctgtggcttcatgagatatgctta
aatcggttctcttctgcttcgaagactcttcatactctcgtgagtcctgaggaagatgct
aaccttacaagcaacaggaaatcactgtcctttgttgaaagaagacgctttctctatctc
tccaaaattgcagcagcagcaggtaaggatgttgattatgaagtgaaggttgcccatata
gatgcagatatccaaattctaaatctgcaggaagagattgttcagcatgacccagagtat
gcaccagataaatatactaccaagccatttcgtccattggaactgatcgagatgtgcctg
aagggagatcgagagctctctcttaaagcttttgaagtatttgcttggacgagggcctcg
ttccggagctccaacaaaggccttctagaggcttgctggatgaatgcagccgaccaggac
gactgggttagccttcaagaggaatcttcaggaggttggagcgatgaagtcatccaagaa
tctcttcagggcactgtcctgttcaatgcctccaggctgtgttatagcccagacgccgtg
gtgtatgacggttcgtttgaggacgtgctgcctgtgaagaaagaagacgtgcatctgaga
ggcttggagggcagatgtctctcagtggaggaagtgctgatgcagcacaaggatttccct
gatgcgggtaaattgatgatgaccgcggtgataatgggcaaggagctaccttatactgtt
tccacagctgaacctgttgacatggactcttga
DBGET
integrated database retrieval system
