Oryza glaberrima (African rice): 127766898
Help
Entry
127766898 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127766898 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
ogl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127766898
03015 mRNA surveillance pathway
127766898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127766898
03041 Spliceosome [BR:
ogl03041
]
127766898
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127766898
Spliceosome [BR:
ogl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127766898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
127766898
NCBI-ProteinID:
XP_052148028
LinkDB
All DBs
Position
3:complement(8530698..8537558)
Genome browser
AA seq
840 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELEHLVDMTKVKMDVMKPWIATRVTELL
GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMKELWSLLLSAQQNASGVPQ
QFLDAKEAEIQQKKAEESRIAQEIQKKREKDGREQELEKQKLMDGDAGNSRLGPDRADAE
EEKELDSKHSSRTKSRESLRSRSISLSPRGRRRSVSPRRRSPSPSRNYISFGRQQRSSRR
SVSPRRSFSPRKRSPRSTPSMSRRRSPYSRRSPSVPRHRSPSPHRRSHIRRKSPPFVRRR
SPSPHHRRSPGRAPRSPSPARHRSPRRRSSLDRHWSPSPGRRRPRSPSPGRRRPRSPSPG
RRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRRPRSRSPGRRRSPSPRGSPRLRSPKRPR
RSPISPRSRSANRRPSPQRRRSTSPHDRSPIHSRRSLSRDIEKGTNGIPSSNDVDVLQRN
KERSHDDNRNDTEVSGHLSSDSEHRKLTKSLNSPNKPERNSTRDSSLKGTDKHLPSQVRT
DSSGEEEGSRARENARKANSSRRKIKDFSADLELKKAHDDLSPGEKSPSQHSGKETRRKQ
NNQLSESSEDERDGRRMKHTVDSPDDSQQKQHTPSRVGMHNSYSKDGMNSEDAIKGLRDG
MASKKYPAKIDDDSESEDGSPFRKDKRKAHGNNNIDSGSSDSEESGKHRSHSEKRKHKKS
RKHKRRYDDSSDESNLESDDKESKRRRKEEKRLRKEERRRRREERHRRKADRQASKLKLK
HAETVDMASDLEKDRESDSDADARKKGSYNGRDESDQQKLEIELREKALESLRAKKAINH
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttccgggggacgtcggccgatcaggacacccgtttctccaacaag
caggcgaagctgctcaagacgcagaagttcgcgcccgagcttgaacacctggtggacatg
actaaggtgaagatggatgtgatgaaaccatggatcgcgacccgtgtcaccgagctccta
gggttcgaggacgaagtgctcatcaacttcatctacggcctcctcgaagagaaggaggcg
gatggaaagaagatacagatacagctgacaggattcatggagaagaacacagtgaagttc
atgaaggagctgtggagcctcctactcagtgcacaacagaatgctagtggggtgccccaa
cagtttttagatgcaaaggaagctgagattcagcagaaaaaggcagaggaaagtagaatt
gctcaggagatccagaagaaacgggagaaagatggaagggagcaagaactagagaaacaa
aaattgatggacggggatgccggtaattctagattaggtcctgatcgtgctgatgctgag
gaggaaaaagaactggattctaagcatagctcaagaacaaagagccgggaaagccttagg
tccaggagcatctccttgtcgcctcgcggtaggcggcgatctgtttctcctaggaggcgt
tctccatctccttccagaaattacatttcttttgggagacagcaacgatcttcaaggcgc
tcagtttcacctaggcgttctttttctccacgaaagcgttctccaagaagtaccccttcg
atgtcgaggcggagatcaccgtattccagaagatcaccttcagtaccaagacatcgatct
ccgtcacctcatcgtagatctcatattcgcaggaaatctccaccttttgtgcgtcggaga
tcaccatctccacaccatcgccggtctccaggtcgtgcaccaagatcaccatctcctgca
cgtcatagatctcctcggcgcaggtcatctctagacaggcattggtctccatctccagga
agacgtaggcctcggtccccttcacccggacgacgtaggccacggtccccttcaccagga
agacgtaggccacggtccccttcaccaggaagacgtaggccacggtccccttcaccagga
agacgtaggccacggtctccatctccgggtagacgcaggccaaggtcacgatctccagga
agacggagatccccctctcctcgaggctctccgcggttgaggtcaccaaaacgccctagg
agatcgccaatttcacccagaagtcgttctgcaaaccgtcggccctctccacaacgaagg
aggagtaccagtccacacgataggagcccaatccattctcgcaggagcttgagtagagac
attgaaaaaggaacaaacggcattccctccagtaacgatgtagatgtgcttcaaaggaac
aaagaaagatcacacgatgacaataggaatgatacagaagtgagtggccatctttcatcg
gattctgagcatcgtaagctgacaaaatccttgaattctccaaacaagccagaaaggaac
tcgacacgcgatagttctttgaagggcactgataagcacttgcccagtcaggtcagaaca
gatagcagtggagaagaggagggcagtcgtgcaagagagaatgcacgaaaagcaaattca
tcacgcagaaaaattaaggatttctcagcagatctggaactaaagaaagcacatgatgat
ttgagccctggagaaaaatctccatcacaacatagtggcaaggagacaaggaggaaacag
aacaatcaactgtcagagtcatcagaagatgagcgtgatggtagaagaatgaaacacacg
gttgattctcctgatgattcccaacagaaacagcacactcctagtagagttggaatgcac
aactcttattcaaaggatggcatgaacagtgaggatgcaataaagggtttacgtgacggt
atggcttctaagaagtatcctgctaaaatcgatgatgattctgagtcagaagatggaagt
ccttttcgaaaagataagagaaaagcacacggtaataacaacattgattctggcagttca
gattcagaagaatcagggaaacatagatcccattctgagaagcgaaagcataaaaagagc
cgtaagcataagagacgttatgatgacagttctgatgaatctaatttggagtcagatgac
aaagagtccaagaggaggagaaaggaagagaagaggttgcgaaaagaggaaagacggcgc
agacgtgaagagcggcaccgtagaaaggcagaccgtcaggccagcaaactaaaactgaag
catgctgaaactgttgatatggcttcagatcttgagaaggatcgtgaatctgactcagat
gctgatgctagaaagaaaggttcatataatggaagagacgaatcggatcagcagaaactt
gaaattgagcttcgcgagaaggctctggaatctcttagagcaaagaaagccatcaaccac
tag
DBGET
integrated database retrieval system
