Oryza glaberrima (African rice): 127766905
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Entry
127766905 CDS
T08853
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
Organism
ogl
Oryza glaberrima (African rice)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
AAA_30
CMS1
YgbB
ERCC3_RAD25_C
zf-CCHC_2
AAA_19
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
127766905
NCBI-ProteinID:
XP_052148036
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Position
3:34006407..34012778
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AA seq
765 aa
AA seq
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MASLLTLPSLSLSNPSASAAAAGAGAAPSLRLRAAFRCWALRRAGGGRWAAAGAIASPNS
VLSEHAFKRLQLSDDEEEEEGAYGSDEEGAYGSDEEGVEAVGGGEGDEDELAIARLGLPE
QLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGR
SVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVV
GTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATM
PGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGK
TIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG
LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRF
DFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGF
SQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTAD
EKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGPATDSYGRFSNSDRGFRN
RRSRGGGSRGGRGGWDSDVEDRFRRGGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSS
YGSRSSSSFGGRSSSFGSRDSSRSFSGACFNCGESGHRASDCPNK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctcctcacgctcccctccctctccctctccaaccctagcgcctccgccgcc
gccgcgggagccggagcggcgccgtctctgcgcctccgcgccgccttccgctgctgggcg
ctgcggcgcgcgggcggcggccggtgggcggccgcgggggccatcgcgtcgcccaactcg
gtgctcagcgagcacgcgttcaagcggctgcagctcagcgacgacgaggaggaggaggag
ggggcatacgggagcgacgaggagggggcctacgggagtgacgaggagggggtcgaggcg
gtgggtggcggggagggggacgaggacgagctcgccattgccaggctcggcctgcccgag
cagctcgtatccacgctcgagaagcgcgggattacccacctgttccccatccagagggct
gtattgattccagctcttgacggccgtgacctgattgctagagcaaagacaggaaccggg
aagacgctagccttcggcattcccatgatcaagcaattaatggaggaggatgatggacgg
agtgtgaggcgaggtcgtattcctcgtgttttggttctagcacctactagggagttagcc
aagcaagttgagaaggaaataaaagaatcagcacccaagctcagtacagtctgtgtttat
ggaggtgtctcatataatgtccagcagaacgcactctcccgtggtgttgatgttgttgta
ggaacacctggtcgcattattgatttgataaatggcggaagtcttcagttgggagaagtt
aagtacttggtccttgatgaggctgaccaaatgctcgcagttgggtttgaggaggatgtg
gaaacgatattacaacagctaccagctgagaggcaaagcatgctcttctctgccaccatg
cctggttgggtgaagaaattatctaggcgatacttgaacaatcctttgacaattgacttg
gtcggcgatcaagatgaaaaacttgctgaaggaatcaaactttatgctatcccgctcaca
tctacatcaaagcgcactgttcttagtgatctcattacggtgtatgcaaagggtgggaaa
accattgtgttcaccaagacgaaaagggatgcagacgaggtatcattagcactgacaaac
agtattgcttcggaggcactgcatggtgatatttcacagcatcagcgtgagaggacacta
aatggttttcgtcaagggaaatttactgttctcgtagcaaccgatgttgctgcccgtggt
cttgatataccaaatgttgatttgattatccattatgaattgcccaatgatccagagact
tttgttcatcgttctggacgcactggccgagctgggaaagcaggaactgcaatcttgatg
ttcacaaacagccagagaaggacagttagatcacttgagcgtgatgttggatgcagattt
gacttcataagtcctccagcaattgaggatgtgctggagtcctctgctgaacatgtcata
gctactttaagaggtgtgcacacggagtcgattcagtacttcattccagcagctgaaaga
ctgcaagaagaattaggacctaatgctcttgcttctgcattggcacatctgagtggattt
tctcagccaccctcttcacgttctcttatcagtcatgagcagggatgggtgactttgcaa
ctaactagagatccaggatatggaagggggttcttttctcctagatctgttactggcttt
ctgtctgatgtttcttcagctgctgctgatgaagttggcaaaattttccttacagcagat
gagaaggttcaaggtgcagttttcgatttacctgaggagattgcgagggatttgcttagt
atggaactgcccccaggaaacaccataaccaaagtgacaaagctacctgcattacaggat
gatggtcctgctactgatagttatggccgattctcaaactcggaccggggtttcaggaac
agacggtccaggggtggtggctcaagaggcgggcggggtggttgggactctgatgttgaa
gacagatttcgccgtggtggcaggagcttcagatctgacaatgatagttggtcagatgat
gactttggtggcgggagaagatcgaaccgttcgtcatcctttggtggccgcgggtcatct
tacggcagccgtagctcgtcatcctttggtggccgctcatcatcttttgggtctagggac
agcagcaggagcttcagtggtgcttgcttcaactgtggcgaaagcgggcaccgagcatca
gactgcccaaacaagtag
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