Oryza glaberrima (African rice): 127766973
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Entry
127766973 CDS
T08853
Name
(RefSeq) SEC1 family transport protein SLY1
KO
K19998
sec1 family domain-containing protein 1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127766973
Membrane trafficking [BR:
ogl04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
127766973
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
127766973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
127766973
NCBI-ProteinID:
XP_052148125
UniProt:
I1PDJ7
LinkDB
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Position
3:complement(23342423..23344777)
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AA seq
623 aa
AA seq
DB search
MALTLRKKQLDSIVRMLHLNQQLQGSPDGVGGGVGSAEEEEAYKILVMDSPCVALLAPVL
RVGELRRHGVTLHLNIDKARQQVPDAPAVYLLRPTAANVDRVAADAAAGLYASFHLNFST
CVPRALLERLASATAASRSAHRVARVADQYLDFVCLEEGLFSLAQPRAYVALNDPAAAEA
DITALVDAIALGLFCVVATLGAVPVIRCARGGPAEMVAAALDARLRDHLIAKPNLFTEAA
STAVASFQRPLLCLFDRNFELSVGIQHDWSYRPLVHDVLGLKSNKLKLPEKYDLDDTDPF
WVANSWLQFPKVAEEIEAQLAKYKQDVDEVNQRTGGGRDGVEFDGTDLIGNTRHLMNAVN
SLPELTERKKMIDKHTNIATALLGHIKGRSLDGYFECENSMLVDGTLDRTKLMNLLRGNG
TKEDKLRLAVTYLLSFETPVPSDLEQVEAALRESEVDMSAFQYVKRIKSLNSQFAGASNT
ASKVNIVDWAEKLYGHSISAMTGVRNLLSDGKQLAVTRAVEALMEGKPNPEVDNYLLFDP
RAPKSGTAGQFRGPFREAIVFMIGGGNYIEYRSLTELTQRSQTTKQVIYGATEILNGVEF
IQQLSELGQKAGLGGVSSSLPPQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccctccgcaagaagcagctcgattcgatcgtgaggatgctgcacctgaac
cagcagctgcagggctcgccggacggggtcggcggaggggtggggtcggcggaggaggag
gaggcgtacaagatcctggtgatggactccccctgcgtcgcgctcctcgcgccggtgctc
cgcgtcggggagctccggaggcacggcgtcacgctccacctcaacatcgacaaggcgagg
cagcaggtccccgacgcccccgccgtctacctgctccgccccaccgccgccaacgtcgac
cgcgtcgccgccgacgccgccgcgggcctctacgcctccttccacctcaacttctccacc
tgcgtcccgcgggccctcctcgagcgcctcgcctccgccaccgccgcctcccgctccgcg
caccgcgtcgcccgcgtcgccgaccagtacctcgacttcgtctgcctcgaggaggggctc
ttctccctcgcccagcccagggcgtacgtcgcgctcaacgaccccgccgccgccgaggcc
gacatcaccgcgctcgtcgacgccatcgcgctcggcctcttctgcgtcgtcgccacgctc
ggcgccgtgcccgtcatcaggtgcgctcgcggcgggccggcagagatggtcgccgccgcg
cttgacgcccgcctccgcgatcacctcatcgccaagcccaatctcttcactgaggccgcg
tccacagcagttgcatccttccagcggccactcctgtgcctgtttgataggaatttcgag
ctttcggtggggatccagcatgattggagctaccgcccgttggtccacgacgtgctcggc
ctgaagtcgaacaaattgaagttgccagagaagtatgatttggatgacactgatccgttc
tgggtggcaaacagctggttgcaattccccaaagtggcagaggaaattgaggcccagctt
gccaagtacaagcaggatgtggatgaggtgaaccagcgcacaggtggtggcagggatggt
gttgagtttgatggcaccgatctcattggcaacaccaggcatctcatgaatgctgtgaac
tcgctcccagaattgacggaacggaagaagatgattgacaagcacacgaatattgcaacg
gcgctgcttggccatatcaaggggaggtctctggatggatatttcgagtgtgagaatagt
atgctcgtggatggcaccttggaccggaccaagttgatgaacctgctgagagggaacggc
accaaggaggataagctccgactggctgtgacctacctgctttccttcgagacaccagtg
ccatctgacttagagcaggttgaggccgctctgcgtgagtcagaagtggacatgtccgcg
tttcagtatgtaaagagaataaagtcactgaattcccagttcgctggtgcatcaaacacc
gcaagcaaggttaacatagttgattgggcagaaaagctttatgggcactccattagtgcc
atgacaggtgtgaggaatttgttatcagatggaaagcagctggccgttacaagggctgta
gaagctttgatggaggggaaaccaaatcctgaagttgacaactacctactatttgatcca
cgggcccctaaatcaggaactgctggacagttcagaggaccctttagagaggccattgtt
ttcatgattggtggtggaaattacattgaatacaggagcttgacagagctaacacaacgt
tcacagactaccaagcaagtcatatatggagcaactgaaattcttaatggggtggagttt
attcagcaactctcagaactggggcagaaagcagggttgggtggtgtcagcagcagcctg
ccaccccagtaa
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