Oryza glaberrima (African rice): 127767001
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Entry
127767001 CDS
T08853
Name
(RefSeq) RING-H2 finger protein ATL39-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127767001
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127767001
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
127767001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
Prok-RING_4
Prok-RING_1
RINGv
zf-RING-like
zf-RING_4
SLX1_C
zf-RING_6
zf-RING_Vps41
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127767001
NCBI-ProteinID:
XP_052148166
UniProt:
I1NRQ7
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All DBs
Position
1:29113837..29114997
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AA seq
238 aa
AA seq
DB search
MDRTSAVPGRVSDPGSAWFGGGERSSSAGPGRNVRLIATAVAAFVSVLGLALFLHLYVCH
VRRRNRRRAAEAAALATANAGAPPKQVGLDPSAIAALPTAAYGKVAGGDAAGGTTECAIC
LGAMQEADAVRVLPACRHVFHVACIDKWLASSSSCPVCRAGVEPPPPPPSTAAARCVHEK
QDAEKEEAAAGSSAPVRVLGASLMKMLSRERPSPRRQPGVHAVEMEDLESQLPRPQQQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggatcggacgtcggccgtgccggggagagtgagcgacccggggtccgcgtggttcggc
ggcggcgagaggagctcgtcggccgggccggggcgcaacgtgcggctcatcgccaccgcc
gtcgccgcgttcgtgtccgtgctcgggctggccctgttcctccacctctacgtctgccac
gtacgccgccggaaccgcaggcgcgcggcggaagcggccgcgctggcgaccgcgaacgcg
ggggcgccgcccaagcaggtcgggctggacccgtcggccatcgcggcgctgccgaccgcg
gcgtacgggaaggtggcgggcggcgacgcggcgggcggcaccaccgagtgcgccatctgc
ctcggcgccatgcaggaggcggacgcggtgcgcgtgctgccggcctgccgccacgtgttc
cacgtcgcctgcatcgacaagtggctcgcgtccagctcgtcgtgcccggtctgccgcgcc
ggggtggagccgccgccgccgcctccgtcaacggcggcggcgaggtgcgtgcacgagaag
caggacgcggagaaggaggaggcggccgccggtagctcggcgccggtgcgggtgctcggc
gcgtcgctaatgaagatgctgagcagggagagaccgtcgccgaggaggcagccgggagtc
cacgccgtggaaatggaagacttggaaagccagctgccgcggccgcaacagcagtag
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integrated database retrieval system
