Oryza glaberrima (African rice): 127767009
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Entry
127767009 CDS
T08853
Name
(RefSeq) heat stress transcription factor B-4d
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127767009
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
127767009
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
127767009
NCBI-ProteinID:
XP_052148170
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Position
3:complement(13573119..13581872)
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AA seq
305 aa
AA seq
DB search
MAFLVERCGGEMVVSMERSHGRSTTTAAAVTAAPAPFLSKTYQLVDDPSTDDVVSWGEDE
ATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLL
SEIHRRKSSSCSQPQPPPPFPMHQHYPLSLFSPPTTTRSPPVGAAAAAAYHFQEEYCSSP
ADYAGGGGDLLAALSEDNRQLRRRNSLLLSELAHMRKLYNDIIYFLQNHVEPVAPPPLAA
ATSCRLVELGPSTTERRRSAASPSGDNDDDAAVRLFGVRLDDDHGKKRRVQLVQEDEGDE
QGSEG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctcgtggagaggtgcggcggcgagatggtggtgtccatggagcgttcgcac
ggccgttcgacgactacggcggcggcggtgacggcggcgccggcgccgttcctgagcaag
acgtaccagctggtggacgacccgtcgaccgacgacgtggtgtcgtggggggaggacgag
gccaccttcgtggtgtggcggccgccggagttcgccagggacctcctcccaaactacttc
aagcacaacaacttctccagcttcgtcaggcagctcaacacctatggtttcaggaagata
gtggctgacaggtgggagttcgccaacgagttcttcaggaagggcgccaagcacctcctc
tcggagatccaccggaggaagtcgtcgtcttgctcacagccacagccgccgccgccattc
ccgatgcaccagcattaccccctcagcctcttctcgccgccgacgacgacgaggtctcct
ccggttggagcagcagcagcagcagcctaccatttccaggaagagtactgctcctctccg
gcggactacgccggcggcggaggcgacttgctggcggcgctgtcggaggacaaccggcag
ctgcggcggcgcaactcgctgctgctgtcggagctggcgcacatgaggaagctctacaac
gacatcatctacttcctgcagaaccacgtggagccagtggcgccgccgccgctggcggcc
gccaccagctgcaggctggtggagctcggcccgtcgacgaccgaacgccgccgtagcgcc
gcctcgccgtccggtgacaacgacgacgacgcggcggtgcggctgttcggcgtccggctg
gacgacgaccatggcaagaagaggagggtgcagctggtgcaggaagacgaaggagacgag
cagggaagcgaggggtag
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