Oryza glaberrima (African rice): 127767113
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Entry
127767113 CDS
T08853
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127767113
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127767113
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
U-box
HVO_0758
Motif
Other DBs
NCBI-GeneID:
127767113
NCBI-ProteinID:
XP_052148297
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Position
3:complement(33439476..33446274)
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AA seq
565 aa
AA seq
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MASPPPGAHRAASSSGALAPAAFPAAAHFASRAAAPFLRQQPHPGGGGDSDGDNAVEEVD
EGDDDEDDEEEEAELADGAPCSSQQRCASTPGIGRAGMNRGNGMRQIEEEQQWQHSHIYN
CGNEQYGHASSREDEPSTIPREMRVENGYGVIGRREGGPASSYWDLLRAHLSDPLTGILM
DDAMILSCGHSYGSNGMQHIYRMKACGKCGQPITEDSIRPNLALRLAVQAFKREEESAKS
LKRRRERLEQVGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEEGKKNGTTENVGSINSA
ARAEKAQPMKVDKSSASGSVKPEKREVNVRGQKPESIKVEKITNNDSKNQQVKVERAPKE
ATRTPDTKKPSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNI
LDEVDARDPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVR
PERLVDISPEEMASDARKLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQL
QTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctcctccgggagcccaccgcgcggcctcctcgagtggggcgctcgcgccg
gcggccttccccgcggcggcccacttcgcctcacgcgccgccgccccgttcctccggcag
caaccccaccccggcggcggcggcgactccgacggcgacaacgccgtggaggaggtcgac
gagggcgacgacgacgaagacgacgaggaggaggaggccgagctggcggacggagcgccc
tgcagctcgcagcagcggtgcgcctccactccaggaatcgggcgggcagggatgaacagg
gggaatggaatgaggcaaatcgaagaggagcagcaatggcagcacagccacatctacaac
tgtgggaacgagcagtatgggcatgcctcgtctagagaggatgaacccagcaccatcccc
agggagatgagggtggagaatggatatggagttattgggagaagagagggaggtcctgca
tccagctactgggacctactcagagcacacctctccgatccgttgacaggtatactcatg
gatgatgcaatgattctatcgtgtgggcactcttatggaagtaatggaatgcagcatatc
tacagaatgaaagcttgtggcaaatgtggtcagccaattaccgaggactctattcgacca
aacttggctctccgccttgcagttcaggcatttaaacgcgaggaagagtcagctaaatct
ctaaaaagaagaagagagcgccttgagcaggttggaaaacgtcttcgttaccttactaag
caccctcactcagacatacaatccatggctacagatcttctggggtactggaaaaaggtt
gttatcgaagaaggaaagaaaaatggtaccacagaaaatgttggatcaatcaactcagcc
gccagagctgaaaaggctcagcccatgaaggttgataagagttctgcatcaggaagtgtg
aagcctgagaaaagagaagtcaatgttaggggccagaagcctgagagcatcaaggttgag
aagatcaccaataatgattccaaaaaccaacaagtcaaggtagagagggctccaaaggaa
gccactagaactcctgatacaaagaagccatcttctgttccaaatggccccccaaagctg
acatctcttgtcaaatgcaatgatcccactagagataaaatccgggaactacttgcagat
gccttctccagggttcatggagagactagcaaagatgacagggaggaagtgagaaacatc
ttagatgaagtggatgcacgagatccattcagagttgctgtgaccgttgaatctgcgtta
tttgagaggctgggacgttcgactggggctcacaaggcaaaatacaggtcaataatgttc
aatcttagagctgacaacaacactgatttccgaagaagggttctccttggccaagtgagg
cctgagaggcttgttgacatatctccagaagagatggctagtgacgcgaggaagcttgag
aataagcagatcaaggagaaggctttgttcgattgtgagcgtggaggagccccaaaggcg
actactgatcagttcaagtgtggcaggtgtggccagcggaagacgacttactaccagctg
cagactcggagtgctgatgagccaatgacaacatttgtgacatgcgtgaactgcaacaac
cactggaagttctgctga
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