Oryza glaberrima (African rice): 127767196
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Entry
127767196 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127767196
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127767196
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127767196
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127767196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127767196
NCBI-ProteinID:
XP_052148414
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Position
3:complement(34447566..34450544)
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AA seq
191 aa
AA seq
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MSSSSASAVPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWNHGPAVQPCKCPICRR
LINLLVPANVSIDNDDDPQIQHVLGEVQHYNRIFGGTPRNLTQRLQDLPFFIRRLFRELL
DPQRTLPLVFRARMVMMVALSAIYVLSPIDILPENVLGLFGFFDDFLVLLIVFLHLAAVY
RSLLLYRHGGH
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcgtcggcgtcggctgtgccgccggaggacgacgtctgctcggtctgccac
gaccgcttccggatcccctgccaggccaactgctcccattggttctgcggagagtgcatt
atccgtgtttggaatcatggacctgctgtacagccttgcaagtgtcccatttgccgtcgc
cttattaatcttctggtaccagcaaatgtatcaatagataatgatgatgatccgcaaatt
cagcatgttctaggagaggttcagcattacaaccgcatatttggtggaacaccccgcaac
ctgactcagaggttgcaagacctaccctttttcatcagaagactgttcagggaactactg
gatccccagaggaccctcccacttgtcttcagggcgaggatggtcatgatggtagccctg
agtgcaatttatgtcctgagccccatcgacattcttcctgaaaacgtgctggggctgttt
ggattcttcgatgacttcctcgtgctgctgatcgtgttcctccaccttgctgctgtctac
cgttctctgctgctctaccgccacggaggccactga
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