Oryza glaberrima (African rice): 127767219
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Entry
127767219 CDS
T08853
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127767219
Membrane trafficking [BR:
ogl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127767219
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
127767219
NCBI-ProteinID:
XP_052148444
LinkDB
All DBs
Position
3:11443953..11458009
Genome browser
AA seq
1836 aa
AA seq
DB search
MDSAAAAGGEGQRFKRIPRQSLAGNLELDPLLNENLDQWPHLNELVQCYKADFVKDDCKY
GRYESVAPPSFQNQIFEGPDTDLETELQLSNDRQSKPDEVTEDDMPSTSGRQLYETEVPA
SSSKKHCSLSPLPAYEPAFDWENERSLIFGQRVPESVPAINSSGLKITVKVLSLSFQAGL
VEPFSGTICLYNRDRREKLSEDFYFHILPTEMQDAQISLDRRGVFSLDAPSPSVCLLIQL
EKAATEEGGVTPSVYSRKEPVHLTDKEKQKLQVWSRIMPYRESFAWAMIPLFENNQAGGA
ASPSSPLAPSMSGSSSQDSIVEPISKLTLDGKLNHYSSGSSVIVEISNLNKVKESYIEDS
LQDPKRKVHKPVKGVLRLEVEKLHNGHNDMDNISEGGSMANDLNDAGELNNGRYNQSSFD
GIHGSLNSSAVAQKDAHQNGQASNTESGENFQAFDFRMMTRSEPFSQLFHCLYVYPLTIS
LGRKRNLFVRVELRKDDSDIRKPPLEAVHPRDRNTTLQKWAHTQIAVGTRMACYHDEVKI
SLPALLTPQHHLLFTFYHVDLQMKPEAPKPVVVGYAVLPLSTHIQLLSDVSLPILRELVP
HYLQESGKERMDYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTSPPWGSEL
LEAINSLKNVESTALLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDGA
ERNRFLVNYVDYAFDDFGDRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFL
ELIVKSMGLEQSRLFYHNLPLGEDVPPLQLKDGVFRCIMQLFDCLLTEVHERCKKGLSLA
KRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSILHDCKLTFLQIICDHDLFV
EMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDARYQKSEDKL
YIAQLYFPLIGQILDEMPVFYNLNAVEKREVLVVILQIIRNLDDMTLIKAWQQSIARTRL
FFKLLEECITHFEHNKTGDSLLLGSSSRSPDAERPASPKYSDRLSPSVNAYLSEASRHEI
RPQGTPENGYMWNRVSPQLSSPNQPYSLREALAQAQSSRIGSTARALRESLHPVLRQKLE
LWEENLSTAVSLEVLGIIDKFSVAAASRSITTDYAKLDCVTSVLMGLLSRSQPLAFWKAF
LPVVYNIFNLHGATLMARENDRFLKQIAFHLLRLAVFRNDSIRKRAVVGLQILVRNSFNY
FKNTTRLRVMLTITLSELMSDVQVTQMKSDGSLEESGETRRLRKSLEEMADVRSKDLLKD
CGLPVNALEAAPEGSTDNRWSWVEVKHLSKCLVQALDAGLEHALLGSEMTLDRYAAAEGF
YKLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRNDAVWSKE
HVASLCKICPIVNTDVSSEASAAEVEGYGASKLTVDSAVKYLQLANKLFAQAELYHFCAS
IQELIIPVYKSRRAYGQLAKCHTSLKDIYESILEQEASPIPFIDATYYRVGFYGERFGKL
NKKEYVFREPRDVRLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQVNADELQPGVCYLQIT
AVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcggcggcggcggggggggaggggcagcggttcaagcgcattccgcggcag
tcgttggcggggaacctggagctggatccactgcttaatgaaaatttagatcaatggcca
catctaaatgagctggttcagtgctataaggctgattttgtgaaagacgactgcaaatat
ggacgatatgaaagtgttgcaccaccatcttttcagaatcaaatttttgagggacctgat
actgacttagaaacagaattgcagcttagcaatgataggcaatccaagcctgatgaagtt
actgaagatgatatgccaagcacatcagggagacaactatatgagactgaagtgcccgct
tcatcctcaaaaaaacactgcagtctatcacctttaccagcatatgaaccggcatttgat
tgggaaaatgagagatctttgatattcggccaacgggtgccagaaagtgtccctgcaata
aacagcagtggattgaagataactgtcaaggtgttatctttgtcatttcaagctggatta
gttgagccttttagtggtacaatctgcttgtacaacagagacagaagagaaaaattgtca
gaagatttctattttcatatactcccaacagaaatgcaagatgctcagatttctctagac
cgccgaggtgttttttcattggatgccccttcaccatcagtgtgccttctgattcagcta
gagaaggctgccactgaggaagggggagtaacaccctctgtttattctcgtaaagaacct
gttcacttgactgataaagagaagcaaaaattgcaagtctggtctcgaatcatgccatat
agagagtcgttcgcatgggctatgattccactgtttgagaacaaccaggctggtggtgct
gcctctcccagtagccctctagcaccaagtatgtcaggctcaagttctcaagatagtata
gtggagcctatttccaagctcactttggatggaaagctcaatcattattcaagtggaagc
tcagttattgtagagatatcaaatttgaacaaagtgaaggaaagctacatagaggactcc
ctccaagaccccaaaagaaaagtacacaaaccagtgaaaggtgtactgaggttagaggtg
gaaaaacttcataatggccacaacgacatggataacatttctgagggcggtagcatggcc
aatgatttgaatgatgctggtgaactcaataatggtagatacaaccagagtagctttgat
gggatccatggttctttgaattctagtgccgtggcccagaaagatgcacatcagaatggt
caagcttccaatacagagagtggtgaaaattttcaagcttttgactttcggatgatgacc
cgaagtgagccattttcacaactcttccattgtctctatgtgtacccactgactattagc
ttgggccgtaaaagaaatctatttgtaagagtggaattgagaaaggatgattctgacatc
cgcaagcctccattagaggctgttcatccaagggatcggaacacaacactacagaagtgg
gcccatactcagattgctgttggaacgagaatggcttgctaccatgatgaagttaaaatc
agtctgcctgctctcttgacaccccaacatcatcttctgttcacattttaccatgtagat
ctccaaatgaaacctgaagcccccaaaccagttgtcgtgggatatgctgttcttccactg
tcgacacacattcagttactttcagacgtatctttgccaattttaagagaacttgttcca
cattacctgcaggaaagtggaaaggaaagaatggactatctggaggatggcaaaactgtt
tttaggttgcgattaagactttgttcttcattattcccagttaatgaaagaataagagac
ttttttgtcgagtatgaccgccatacacttcatacaagtccaccttggggttctgagctt
cttgaggccataaacagtttaaagaacgttgaatctactgcactgttgcaatttctccaa
cccatacttaatatgctacttcatcttatcggtgatggtggtgaaacccttcaggttgcc
gcatttcgagctatggtcaatatcctaacccgggtccagcaggaatcatctgatggggct
gagagaaatcggtttcttgttaattatgttgattatgcttttgatgactttggtgatcgg
caagcacctgtataccctggactgtctactgtttggggaagcctggctcggagtaaggct
aaaggttatagagttgggccagtctatgatgatgtgctggcaatggcttggttttttctg
gagcttattgtaaaatcgatgggattggaacaaagtcgtctattttaccataatcttcca
ctaggtgaagatgtcccaccgctacagttgaaagatggtgtcttccgatgtatcatgcag
ctgtttgattgccttctaactgaggttcatgagcgctgtaaaaagggtttaagcttggcg
aagcgcttgaacagcacacttgctttcttttgttatgatcttctatcaattattgagcca
cgccaagtttttgagctggtttcattgtatatggacaagtttgcaggagtttgccagtca
attctccatgattgcaaattgacattccttcagataatatgtgaccatgatctttttgtt
gagatgcctggtcgtgacccctctgatagaaattatctctcgtcagtacttattcaagag
atttttctcacccttgaccatgatgatctatctcagcgagcgaaagcagcccgtattttg
gttgttctaatatgcaagcatgaatttgatgcacggtatcaaaaaagtgaagacaagctg
tacattgctcagctgtattttcctcttataggacagattctagatgagatgcctgtattc
tataatctaaatgctgttgaaaagcgtgaggtgctggtagtcattttgcaaatcataagg
aacttggacgacatgactctgatcaaagcatggcaacagagcattgctagaaccagattg
ttcttcaagctacttgaagaatgcattacccattttgagcacaacaaaacaggagacagc
ttgttactaggctcaagttcacggagccctgatgctgagcgccctgcatctccaaagtac
tccgatcgattatccccatcagttaatgcatatttgtctgaggcatcacgccatgaaata
aggcctcagggaacaccagaaaatggatacatgtggaacagggttagtcctcaactgagc
tctcctaaccagccctattcattgagagaagcacttgctcaagcgcagtcttcaaggatt
ggatcaaccgcgagggcactgagagaatctctacatccagtgctgagacaaaagttggaa
ctgtgggaagaaaatctcagtactgctgtgagcctggaagtgttgggaataattgataag
ttttcagtcgctgcagcttctcgtagcatcactactgattacgcaaagctagattgtgta
acatctgtattaatgggtcttttatcaaggagccagcccttagctttttggaaagctttc
cttcctgtggtgtataatatatttaacctccatggcgcaacactgatggcaagggagaat
gatcgcttcttgaagcaaattgcttttcatcttttgcgccttgctgttttccggaatgat
tctattagaaaaagggctgttgtcgggttgcagattcttgttaggaactcgtttaattat
tttaagaacaccacaaggttgagggtgatgttgacaatcactttgtcagaacttatgtct
gatgtgcaagtaactcagatgaaatctgatggctctcttgaggaaagtggtgaaactcgg
cgccttaggaaatcactagaggaaatggctgatgtacgaagtaaggatctcttgaaagat
tgtggcctccctgttaatgcactggaggcagcgcctgaaggttcgactgataataggtgg
tcttgggtagaagttaaacatctatccaaatgtctagtccaggcccttgatgctggtctt
gaacatgccctcttgggctctgaaatgactctggacaggtacgcggctgctgagggtttc
tataagctagcaatggcctacgcgcctgtgccagatcttcatataatgtggttactgcat
ctatgtgatgcacatcaggagatgcaatcatgggctgaagctgcacaatgtgcagttgct
gtagctggtgttatcatgcaggcacttgttggaaggaatgatgcggtgtggagcaaggag
catgttgcttccctatgtaagatttgccctattgtgaacactgatgttagctcagaagca
tctgcagcagaagttgagggatatggtgcatccaagcttactgtggattcagctgtcaag
tatcttcagctggcaaacaaactttttgcacaagccgaactctatcacttttgtgctagt
attcaggaactcatcattcctgtgtataaaagcagaagggcatatgggcagctggctaag
tgccatacatcactcaaggatatctatgagtcaattcttgaacaggaggctagtcctata
ccattcattgatgctacctactaccgggtagggttttatggggagcggtttggcaaactc
aacaaaaaggagtatgtgttcagagagccaagagatgttcgtcttggtgacataatggag
aagcttagtcatatctatgaggctaaaatggatggcaatcacaccttacacatcattccg
gattcgagacaagtcaacgctgatgagttgcaacctggtgtctgctatctgcagataact
gctgttgatcctgtaatggaggatgaggacctagggagtagaagggaaaggattttctct
ttatctactggtactgtccgggcccgtgtgttcgaccgttttctttttgatacaccattc
acaaagaatggaaaaacacaaggtggccttgaagatcagtggaagaggcgcacagtactc
cagacagagggttcctttcctgctttggtgaatcgtctgttagtgatcaaatcagaatct
ctagagttttctcctgttgagaatgcgattggaatgatcgagacaaggacagctgccttg
cgaaatgaactagaagaaccacgcagttcggaaggtgaccaactcccaagactccaaagc
ctgcagaggatactccaaggaagtgtggctgttcaggtaaatagtggtgtattaagtgtg
tgcactgcattcttgtctggtgagcccgcaactaggctccgatctcaagaactgcagcag
ctcatcgctgcattgctggaattcatggccgtctgcaagcgcgcaatccgtgtgcatttt
agattgataggggaagaagaccaggaattccacactcaactagtcaatggctttcagtcg
ctcacagctgagctttcacactatattcctgcaattctttcagagctataa
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integrated database retrieval system
