Oryza glaberrima (African rice): 127767313
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Entry
127767313 CDS
T08853
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127767313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127767313
03051 Proteasome [BR:
ogl03051
]
127767313
Membrane trafficking [BR:
ogl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
127767313
Proteasome [BR:
ogl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127767313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
Rad60-SLD
UBA_7
Dsc3_N
Rad60-SLD_2
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
127767313
NCBI-ProteinID:
XP_052148562
UniProt:
I1P783
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All DBs
Position
3:complement(1755029..1759819)
Genome browser
AA seq
534 aa
AA seq
DB search
MGGGDGEEAAAAAAAATLHIRCTNGSKLAVRADLGLSVGAFKAIVAESCDVPAPQQRLIY
KGRILKDEQTLASYGVETDHTIHMVRGAAPPPASTAPPAANNVTPAINATTASNSPAVGF
GGLLHGLGGSGSANSGGLGSFGSGLPELSQMQQQLSENPTLMREIMNMPLMQNILNSPDL
IRNIIMNNPQMREIVDRNPDLAHVLNDPSILRQTVEAARNPELMREMMRNTDRAMSNIES
SPEGFNMLRRMYETVQEPFLNATTMAGEGDRSSNPFSALLGNHGSNQARDPAANSPTTTS
ESTTGSPAPNTNPLPNPWSTTAGAAQGATRPSPVTNARSATAGGLGGLSSTDLGGMLGGG
SDTSFLSQVLQNPTMMQMMQNIMSNPQSMNQLLNINPNVRNMMESNTQLREMFQNPEFVR
QLTSPETLQQLISFQQSLMSQLGQQQAGPERTQSGAGAGNTNLNNLMSMFSGLGAGGGLG
VPSAPNVPPEELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVERLLGNIG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggggacggggaagaggcagccgccgcggcggcggccgcgacgctgcacatc
cggtgcaccaacggctccaagctcgcggtgcgggccgacctggggctcagcgtcggggcg
ttcaaggcgatcgtcgccgagagctgcgacgtgccggcgccgcagcagcggctgatctac
aagggccggatcttgaaggacgagcaaaccctagccagctacggtgttgagacggatcac
accattcacatggtccgtggtgctgcaccaccaccagcgtcaaccgcacctcctgcagcc
aacaatgtaactcctgccattaatgctaccactgcttccaattcaccagcagttggtttt
ggaggcttgttgcatggtcttgggggttcaggttctgctaacagtggagggttgggctca
tttggttctggccttccagaactatcccagatgcaacaacagctatccgagaaccctacg
ttgatgagagaaataatgaatatgccactcatgcagaatatattgaatagccctgatcta
attcgcaatataattatgaacaacccccaaatgcgtgaaattgttgatcgtaatccagat
cttgctcatgtcctcaatgatccgagcattctccgccagactgttgaagcagctaggaat
cctgaacttatgcgagagatgatgcggaacacagacagagccatgagcaacattgaatct
tctccagaagggttcaatatgctccgccgcatgtatgaaactgttcaagagccatttctg
aatgcaacaacgatggctggggagggtgatagaagttcaaacccattttctgctctccta
ggaaatcatggatcaaaccaagccagagatccagctgcaaattcaccaacgaccacctca
gaatccacaacaggttctcctgctccaaacactaatccacttccaaatccctggagcaca
actgctggagctgcacagggagcaacaaggccctctccagttaccaatgcaaggagtgcc
acagctggtggcctaggagggttaagttctacagatttgggaggtatgctgggtggtggc
tcggatacttccttcttgagtcaggtgttgcaaaatcctacaatgatgcaaatgatgcag
aatattatgtcaaatcctcagtccatgaatcagctgcttaatatcaacccaaatgtacgt
aatatgatggaatctaacactcagttgagggagatgttccagaacccagaatttgttcgc
cagttgacatctcctgaaactttgcagcaattaatctcattccagcagtccttgatgtca
caacttggtcaacaacaagctggcccagagcgaacccaatcaggtgctggtgcaggcaat
actaacctcaacaatctgatgagcatgttcagtgggctcggtgctggtggtggcctaggt
gttcctagtgcacccaatgttccaccagaagagctatatgcaacacaactagctcagctc
caagaaatgggtttctttgacacacaggagaacattcgagctttgattgctacagcggga
aatgttcatgctgcggtggagcgacttcttgggaatattggctga
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