Oryza glaberrima (African rice): 127767569
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Entry
127767569 CDS
T08853
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127767569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogl04040
]
127767569
Ion channels [BR:
ogl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127767569
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
127767569
NCBI-ProteinID:
XP_052148908
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Position
3:30741668..30747085
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AA seq
831 aa
AA seq
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MAVFETVGRRGAAAVGAWWRCVHVRPTWTRRWDPVQLYRLQLSLHVTLSALSHHSEDSRR
RCRLPVRRHEHEAELQLRLRLLSLYTLRAPGGPFHGFLHRSWAMPSLSFLRFLSGRSLAD
VCDGVKRRLGLGDDEGREEEAGLAGGSSRPAAAAAAAVAGPPGECYACTQPGVPSFHSTT
CDQVHSPDWDADAGSSLVPVQAQPSAAHHAAAAAARWVFGPVLDPRSKRVQRWNRWILLA
RAAALAVDPLFFYALSIGRAGQPCVYMDAGLAAAVTALRTAADLAHLAHVLLQFRVAYVS
RESLVVGCGKLVWDPRAIAAHYARSLKGLWFDLFVILPIPQVIFWLVIPKLIREEQIKLI
MTILLLLFLLQFLPKVYHSIYIMRKMQKVTGYIFGTIWWGFGLNLFAYFIASHIAGGCWY
VLAIQRVASCLQEECKIKNTCNLISLACSKETCFHLPWSDKNGLACNLTSFGQQNIPDCL
SGNGPFAYGIYKGALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSIIN
VLSGLMLFTLLIGNIQVFLHAVLARKRKMQLRFRDMEWWMRRRQLPSRLRQRVRKYERER
WAAITGDEEMEMIKDLPEGLRRDIKRYLCLELVKQVPLFHGMDDLILDNICDRLRPLVFS
SGEKVIREGDPVQRMVFVLQGKLRSTQPLAKGVVATCMLGAGNFLGDELLSWCLRRPFLD
RLPASSATFECVETAQAFCLDAPDLRFITEQFRYKFANEKLKRTARYYSSNWRTWAAVNI
QLAWRRYKARTTTDLASAAQPPSAGGPDDGDRRLRHYAAMFMSLRPHDHLE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgagacggtgggtagacgcggtgcagccgcggtaggcgcatggtggcgg
tgcgtccacgtacggcccacgtggacacgcaggtgggacccagtacagttgtaccgtctc
cagctctccctccacgtcaccctctccgctctatctcatcattcggaggactcacgccgc
cgctgccgcctgcccgtacgcaggcacgagcacgaggcagagctccagctccgcctccgc
ctcctctctctctatacgcttcgagctccgggaggcccctttcatggtttcctccaccgt
tcatgggccatgccttccctctccttcctccgcttcctctccgggaggtcgctcgcggat
gtgtgtgatggggtgaagaggaggcttggattgggggatgatgaaggccgggaagaggag
gctggtctggccggagggtcgagccgtccggcggcggcggcggcggcggcggtggcgggg
cctcccggcgagtgctacgcgtgcacgcagcccggggtgccgtcgttccactccacgacg
tgcgaccaggtgcactcgccggactgggacgcggacgcgggctcgtcgctagtgccggtc
caggcgcagccgtcggcggcgcaccacgcggcggcggcggcggcgcggtgggtgttcggc
ccggtgctcgacccgcggagcaagcgcgtgcagcggtggaaccggtggatcctgctggcc
cgcgccgccgcgctggcggtggacccgctcttcttctacgcgctctccatcggccgcgcc
gggcagccgtgcgtgtacatggacgccggcctcgccgccgccgtcacggcgctccgcacc
gccgccgacctggcgcacctcgcccacgtcctcctccagttccgcgtcgcctacgtctcc
cgcgagtccctcgtcgtcggctgcggcaagctcgtctgggacccccgcgccatcgccgct
cactacgcccgctccctcaagggcctctggttcgatctcttcgtcatcctgcccatccca
caggtcatcttctggctagtcataccgaagttaatcagagaagagcaaatcaaacttatc
atgacaatactgctgctcttattcttgctgcaatttctccccaaggtgtaccacagtatt
tatatcatgaggaaaatgcagaaggtgactggttacatctttggaacgatatggtgggga
ttcgggcttaatcttttcgcctatttcattgcttctcacatcgcaggtggatgttggtat
gtccttgcgattcagcgtgtcgcctcctgcctccaggaggaatgcaagataaagaacact
tgcaacctaatatcacttgcttgctccaaggagacgtgttttcaccttccttggtcagat
aagaatggactggcatgcaacttgacttcttttggccaacaaaacattccagactgtcta
agcggcaatgggccctttgcttatggaatctacaaaggggctctgcctgttatttccagc
aattcacttgctgttaaaatactctaccctatattttggggactcatgactctcagtact
tttggtaatgatcttgagcctacaagcaattggcttgaggtgattttcagcataatcaat
gtacttagcgggttgatgctcttcacattgctgattggaaacatacaggtcttcttgcat
gctgtcttagcaagaaagcgaaagatgcagctgcggttccgggacatggaatggtggatg
cggcggaggcagttgccgtcccgcctgaggcagagggtccggaagtacgagcgtgaacgc
tgggcggccatcacgggagatgaggagatggagatgatcaaggacctgcctgaagggctc
aggcgagacatcaaacgctacctctgcctcgagctagttaaacaggttcctctgttccat
ggcatggacgatctcatcctggacaacatctgcgacaggctgaggccactggtgttctcc
agcggcgagaaggtgatccgggagggcgacccggtgcagcggatggtgttcgtcctccag
gggaagctccggagcacgcagccgctggccaagggcgtggtggcgacgtgtatgctcggc
gccggcaacttcctcggcgacgagctgctgtcgtggtgcctccggcggccgttcctggac
cggctgccggcgtcgtcggcgacgttcgagtgcgtcgagacggcgcaggcgttctgcctc
gacgcccccgatctgcgcttcatcacggagcagtttcggtacaagttcgccaacgagaag
ctcaagcggacggcgcgctactactcctccaactggcggacgtgggcggcagtcaacatc
cagctcgcgtggcgccggtacaaggcaaggacgacgaccgacctggcgtcggcggcgcag
ccgccgtccgccggcgggcccgacgacggggaccgccggctccgccattacgcggccatg
ttcatgtcgctcaggccacacgatcacctcgagtga
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