Oryza glaberrima (African rice): 127767577
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Entry
127767577 CDS
T08853
Name
(RefSeq) upstream activation factor subunit spp27-like
KO
K15223
upstream activation factor subunit UAF30
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127767577
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
127767577
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
MTBP_C
SRP54_N
Nop14
Myc_N
CCDC106
DUF5364
Motif
Other DBs
NCBI-GeneID:
127767577
NCBI-ProteinID:
XP_052148918
UniProt:
I1PFS8
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Position
3:31021517..31028266
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AA seq
336 aa
AA seq
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MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLSEVAG
KAEQEEAEVPKEEEPETGAEAAGGEPGGAEGEGEEEEEEEEEEEEEEEEEEEDSSGSRKK
RRSDGANTDGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNK
RKILCDERLKKIFNVNSIDMFQMNKALTKHIWPLNSDGPVTSASPERSTPKEKPQKRERN
EGKKQKGGSSGSGSGFLVPLQLSDDLVKFIGTGESMLSRSDVVKRMWDYIKENKLQDPSD
RRKIICDEKLKDLLQVESFNGFTVSKLLAPHFTKTK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggagctggtggagcggctgcgggaggtgctgcggtcgtccgacctt
aacaccaccactaccgccatcctgcgccgccgcctcgaggaggacttcggcgtcgacctc
tccgacaagaagctcttcatccgcgagcaggtcgacctcctcctctccgaggtcgccggc
aaggccgagcaggaggaggcggaggtgcccaaggaggaggagcccgagaccggggcggag
gccgcgggtggagagccagggggcgctgaaggggagggggaagaagaggaggaggaagag
gaagaggaggaggaggaggaggaggaggaggaggaagacagtagcggcagccggaagaag
cggcgatcagatggagccaatactgatggcaagagaaaaggtggtggcttcaccaaatta
tgtagcatttccccaacgcttcaagagtttgttggtgcctctgagttagctaggacagag
gtagtcaagaagctttgggcatatatccgagaaaataacttgcaagacccaagcaataag
aggaagattctgtgtgatgagagattgaagaagatcttcaatgtcaactccatcgatatg
ttccaaatgaataaagcattgacgaaacacatatggccattgaattctgatggtcctgtg
acctctgcctcacctgagagatcaacacccaaagagaagcctcaaaagagagaaagaaat
gaagggaagaagcaaaaaggtggttcttctgggtctggatctggttttcttgtgcccctt
caactttcggatgatttagtgaaattcattggcactggtgagagtatgctttcgcgatct
gatgttgtgaaaagaatgtgggactatataaaagagaataaattacaggatccttctgac
cggaggaaaataatatgtgacgagaagctgaaggatctattgcaagttgaatcattcaat
ggctttactgtttcgaagctgcttgctccccatttcaccaagacaaagtag
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