Oryza glaberrima (African rice): 127767904
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Entry
127767904 CDS
T08853
Name
(RefSeq) cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial-like
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127767904
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127767904
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127767904
Enzymes [BR:
ogl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
127767904
Amino acid related enzymes [BR:
ogl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
127767904
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127767904
Prokaryotic type
127767904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
DALR_2
GCP_C_terminal
YonK
PXA
VBS_C3G9
tRNA_lig_CPD
DUF7118
TFIIA
Ndc1_Nup
Topoisom_I_N
DUF2203
Motif
Other DBs
NCBI-GeneID:
127767904
NCBI-ProteinID:
XP_052149346
UniProt:
I1P7G8
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Position
3:complement(2296778..2300554)
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AA seq
528 aa
AA seq
DB search
MAESAKPTPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLY
RYLKFLGYEVEYVRNFTDIDDKIIKRANEAGETVTSLSSRFINEFLLDMAQLQCLPPTCE
PRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVD
TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIF
PHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDLYHPMALRFF
LMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVLVPVEEQDMVNK
HHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQKQQKQKQ
QQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRAGLTEELLQE
QIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPCEPESE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagcgcgaagccgacgccgcagctggagctcttcaactcgatgacgaagaag
aaggagctcttcgagccgcttgtggaggggaaggtccgcatgtatgtgtgcggcgtcacg
ccctacgacttcagccacatcggccacgcccgcgcctacgtcgccttcgacgtcctctac
aggtatcttaaattcttggggtacgaggtcgaatatgtgcgcaacttcactgatattgat
gacaagattatcaaacgagcaaatgaagctggtgaaactgtaactagcttgagtagccgg
tttattaatgaattccttctcgatatggctcagctccagtgcttacccccaacttgtgag
ccacgtgtgacggatcacattgaacatattatagagttgataaccaagataatggagaat
gggaaagcctatgctatggaaggagatgtttacttttcagttgatactttccctgagtat
ctcagtttatctggaaggaagttagatcataatcttgctggttcgcgggttgctgtcgat
acaagaaagcggaaccctgcagactttgcgctgtggaaggctgctaaggaaggcgaacct
ttctgggatagcccatggggccgtggtagaccaggatggcatattgaatgcagtgcaatg
agtgctcattatttaggacatgtgtttgatatccatggtggagggaaagatctgatattt
cctcatcatgagaatgagcttgctcagagccgggcagcttatccagaaagtgaggtcaaa
tgttggatgcacaatgggtttgttaacaaggatgatcagaaaatgtcaaagtcagataaa
aatttcttcacaatccgagatattattgatctgtaccatcccatggctttgaggtttttc
ctgatgcgcacacattacagaggagatgtgaatcactctgacaaagcacttgagatagca
tctgatcgtgtctactacatatatcagactttatatgactgtgaggaagtgttgtctcaa
tatcgtggagagaatatctctgtcctggtccctgttgaggaacaagatatggttaacaag
caccattcagaattcttggaatctatggcggatgatcttagaacaacagatgttctggat
ggcttcactgacttgctgaaggcaattaacagcaatttgaatgattttaagaagttgcaa
cagaagctagagcagcaaaagaagaaacaacaacagcagaagcagcagaagcaaaagcag
cagcaggcacagaaacaaccagaagaatatattcaagctatgtttgcacttgagacagaa
attaaaaataaaatatctatccttggtctgatgccaccttcttccttggcagaggcactg
aagcaacttaaggataaagctttgaagagagcagggttgactgaagaactgttgcaggag
caaattgagcagagaactgctgcaaggaaaaacaagcagtttgatgtgtctgaccaaatc
aggaaacagctaggcagcaaaggcatagccctcatggatgaacctactggtacagtatgg
agaccatgcgagccagagtctgaatag
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