KEGG   Oryza glaberrima (African rice): 127768024
Entry
127768024         CDS       T08853                                 
Name
(RefSeq) 25.3 kDa vesicle transport protein-like isoform X1
  KO
K08517  vesicle transport protein SEC22
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04130  SNARE interactions in vesicular transport
ogl04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    127768024
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127768024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127768024
Membrane trafficking [BR:ogl04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    127768024
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 127768024
NCBI-ProteinID: XP_052149486
LinkDB
Position
3:complement(32238338..32242266)
AA seq 241 aa
MGVDLAVHLVFWCSLQVSGLLDKMVKLTMVARVTDGLPLAEGLDDGRDQKDADFYKQQAK
LLFKNLSKGQHEASRMSIETGPYFFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFE
RVNCSQIETAARPYAFIKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEV
LGVGEKLDQVTEMSTRLTSDTRMYADKAKDLNRQALIRKYAPVAIVIGVVLMLFWLKNKI
W
NT seq 726 nt   +upstreamnt  +downstreamnt
atgggtgtggatctcgcggttcatttggtattctggtgcagtttgcaggtttctggcctt
cttgacaaaatggtgaagctgacaatggtagcacgtgtcactgatggccttccactggca
gaagggttggatgatggacgggatcagaaggacgctgacttttacaagcagcaagctaaa
cttcttttcaaaaacttatcaaaggggcaacatgaagcctcacggatgtcaattgagact
gggccatacttttttcattacatcattgaggggcgagtatgttatctgacaatgtgtgac
cgttcttatccaaagaaacttgcattccagtacctagaagatctgaaaaacgaatttgaa
agagtcaattgcagtcaaatcgaaacagctgcaaggccatatgcctttattaagtttgac
acattcattcagaagactaagaaactttatttggacactagaacccagaggaatcttgcg
aaattgaatgatgagctctatgaggtgcatcagattatgactcgcaatgttcaagaagtt
cttggtgtcggtgaaaagctagaccaggtcactgaaatgtcaactaggttgacttctgac
acaagaatgtatgcagataaggctaaggatctcaatcgccaggccttgattcggaagtat
gcccccgttgccattgtgatcggtgtagttttgatgctcttttggttgaagaacaagata
tggtaa

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