Oryza glaberrima (African rice): 127768352
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Entry
127768352 CDS
T08853
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127768352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127768352
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
127768352
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR41
Tricorn_2nd
Beta-prop_RIG_1st
NBCH_WD40
KNTC1_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Peptidase_M10_C
Beta-prop_VPS8
Pep3_Vps18
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
127768352
NCBI-ProteinID:
XP_052149867
UniProt:
I1P713
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Position
3:1230187..1233856
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AA seq
523 aa
AA seq
DB search
MDHHHHHLPPPPPRSPMENSASSKPPTPASTPSSRLAAAPSSRVSSAAPHPSPSSSAPTP
ASRTVYSDRFIPSRAGSNLALFDLAPSPSHHDAAAAAASPGAPPPSGSTPASSPYCALLR
AALFGPTTPDRVASSASACSSSSSAGASPVGSPATGNIFRFKAEVPRNAKRALFSDGDDE
GVLFPGVFTTRGTGPRKIPRSPYKVLDAPALQDDFYLNLVDWSSHNILAVGLGNCVYLWN
ACSSKVTKLCDLGVDDNVCSVGWAQRGTHLAVGTNQGKVQVWDATRCKRIRTMESHRMRV
GALAWNSSLLSSGSRDKSILHHDIRAQDDYISRLAGHKSEVCGLKWSYDNRQLASGGNDN
RLYVWNQHSAHPVLKYTEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNMHLNC
VDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDG
QTIVTGAGDETLRFWNVFPSPKSQSSDSLSSIGATSFVRSYIR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccaccaccaccacctgccgccgccgccgccgcggtcgccgatggagaactcc
gcgtcctccaagccgcccaccccggcgtccaccccgtcgtcgcgcctcgccgccgcgccg
tcctcccgcgtctcctccgcggcgccgcacccctccccgtcctcctccgcgcccacgccg
gcctcgcggacggtctacagcgaccgcttcatccccagccgcgccggatccaacctcgcg
ctcttcgacctcgccccgtcgccgtcccaccacgacgccgccgccgccgccgcctccccc
ggcgcgccgcccccctccggatctaccccggcctcgtcgccctactgcgcgctcctccgc
gccgcgctcttcggccccaccacgcccgaccgggtggcgtcgtcggcgtccgcgtgctcc
tcctcctcctccgccggggcgtcgcccgtgggctcacccgccaccggcaacatattcagg
ttcaaggcggaggtgccccggaatgctaagcgcgcccttttctccgacggggacgacgag
ggcgtgctcttccccggggtgttcacgacgaggggcactggccccaggaagatccctagg
tcaccttataaggtgctggatgctcccgcattgcaggatgacttctacctgaaccttgtg
gattggtcttcgcataatatccttgcagttggattggggaattgtgtctacttatggaat
gcatgcagcagcaaggtcaccaagctatgtgatttgggggtggatgacaatgtctgttca
gtgggttgggcacagcgtggcactcaccttgctgtagggacaaaccaaggcaaagttcag
gtatgggatgccactcgttgtaagagaataagaaccatggaaagccatcggatgcgagta
ggtgctcttgcatggaattcatcattgctttcgtcaggcagtcgtgacaagagcatcctt
caccatgatatccgtgcccaggatgattatattagtagacttgctgggcataaatcggag
gtctgtgggctcaagtggtcttatgataaccgtcagcttgcatctggtggtaatgacaac
agactttatgtatggaatcaacactcggcgcacccagtactgaagtatactgagcataca
gcagctgtcaaagctattgcgtggtcacctcatcttcatgggctgcttgcatctggtgga
ggaactgcagatagatgcatacgattttggaataccaccacgaatatgcacttaaattgc
gtcgacacaggcagtcaggtctgtaatcttgtatggtcaaagaatgttaatgagcttgtt
agcactcatggatattctcaaaatcagataattgtttggcgatacccaacaatgtcaaag
ctcgccacattgacaggccatacatatagggtattatatttagccatctccccagatgga
cagactatagtaactggcgctggtgatgaaacgcttcggttttggaacgtgtttccatct
cccaagtcccagagttctgacagcctaagtagcatcggggccacatcatttgttaggagc
tacatccggtga
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