Oryza glaberrima (African rice): 127768628
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Entry
127768628 CDS
T08853
Name
(RefSeq) protein argonaute 4A
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127768628
03036 Chromosome and associated proteins [BR:
ogl03036
]
127768628
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127768628
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127768628
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
127768628
microRNA pathway
RISC loading complex
127768628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
127768628
NCBI-ProteinID:
XP_052150209
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Position
1:complement(8827129..8834697)
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AA seq
904 aa
AA seq
DB search
MESNSGEIEELPPPPPLPPNAEPIKTDDTKKLSKSKRALMARSGCGKKGQPIQLLTNHFK
VSLKAADEFFHHYYVNLKYEDDRPVDGKGIGRKVLDKLQQTYASELANKDFAYDGEKSLF
TIGALPQVNNEFTVVLEDFNTGKSSANGGSPGNDSPGNDRKRVRRPYQTKTFKVELNFAA
KIPMSAIAQALRGQESENTQEAIRVIDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGG
VMGCRGFHSSFRATQSGLSLNIDVSTTMIVKPGPVVDFLLANQKVDHPNKIDWAKAKRAL
KNLRIKTSPANTEYKIVGLSERNCYEQMFTLKQRNGDGEPEGVEVSVYEYFVKNRGIELR
YSGDFPCINVGKPKRPTYFPIELCSLVPLQRYTKALSTLQRSSLVEKSRQKPEERMSVLS
DVLKRSNYDSEPMLNSCGISIARGFTQVAGRVLQAPKLKAGNGEDLFARNGRWNFNNKRL
IKASSIEKWAVVNFSARCNIRDLVRDIIKCGGMKGIKVEDPFDVIEEDPSMRRAPAARRV
DGMIDKMQKKLPGQPKFLLCVLAERKNSDIYGPWKRKCLAEFGIITQCVAPTRVNDQYIT
NVLLKINAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSR
EWPLVSKYRASVRSQSPKLEMIDGLFKPQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIF
RDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQNNVPPG
TVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRS
TTAISVVAPICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSS
MFFC
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacagtggtgaaatcgaggagttgccacctcccccacctttgccaccaaat
gctgagccaattaaaactgatgatacaaaaaagttatcaaaatctaagagggccttgatg
gctcgctctggttgtggcaaaaaagggcagccgatacagctgctgacgaaccacttcaag
gtttcactgaaggcagcagacgaatttttccatcactactatgttaatctgaagtatgag
gatgatagaccagtggatggaaagggcataggtagaaaggtgctggacaaactccagcag
acctatgcgtctgagctggcaaataaagattttgcatacgatggtgagaagagcctgttc
accattggtgctcttcctcaagtgaacaatgagttcacggtagttctggaagacttcaac
actggaaagtcatctgcaaatggtggcagccctggcaatgacagtccaggaaatgacagg
aaaagggttagaaggccatatcagacgaaaacttttaaagttgagctgaactttgcagca
aaaattcctatgagcgccattgctcaggccttgagaggccaggaatctgaaaacacccaa
gaagcaattcgtgttattgatattatattaagacagcattccgcaaaacagggttgcctt
ttggttcgccaatcctttttccataacaatccttcaaattttgttgacttgggtggtggt
gtgatgggctgtaggggattccattcaagcttccgagctacacagagtggactttcactc
aatatcgatgtgtccacaacgatgattgtgaaacctggtcctgtggtagattttctactt
gccaaccagaaggttgatcacccaaacaaaattgactgggcaaaggccaagcgtgctctg
aagaatttaaggataaaaacaagtccagcaaatactgaatacaagattgttggtttgagt
gagagaaactgctatgaacaaatgttcactttgaagcaaagaaatggtgatggtgaacct
gaaggtgtggaagtatctgtttacgagtactttgtgaagaatcggggcatagagttgaga
tactctggtgattttccctgtatcaatgtggggaaaccaaaacggccaacttattttcca
attgagctctgctctcttgtgcctttgcaaaggtataccaaggctttgagtacactacag
aggtcttcgcttgttgagaagtccaggcagaaacctgaagaaaggatgtcagttttgtct
gatgtgctgaaacgcagcaactatgattcagagcctatgttgaattcttgtggtatttca
attgctcgaggttttacacaagttgctggcagggtgctgcaggcccccaagctaaaagct
ggaaatggtgaagatctttttgcacgtaatgggcggtggaactttaataataagaggctc
attaaggctagcagtatcgagaaatgggcagttgttaacttttctgcacggtgtaatatt
agggatcttgtccgagacatcatcaagtgtggtggcatgaaaggaattaaagtagaagat
ccatttgatgtcattgaggaggacccttcaatgcgacgagctcctgctgcaagaagggta
gatggcatgattgacaagatgcaaaaaaagcttcctggacaaccaaagtttctgctctgt
gttcttgctgagaggaagaattcagatatttatgggccctggaagcggaaatgtcttgct
gaatttgggattattacacaatgtgtggcccctactagggtcaatgatcagtatattaca
aatgtactgttaaagataaatgcaaagcttggtggcttgaactccctgcttcaaattgaa
acatccccttccattcctcttgtatccaaggtcccgacaataatattgggaatggatgtt
tcccatggatcacctggacagtctgatataccttcaattgctgcggtcgttagttctcgt
gaatggcctcttgtatcaaaatacagggcttcagtccgttctcagtcacctaagttagaa
atgattgatggactatttaagccacaaggagctcaggaagatgatggcctcattcgggag
ttattagttgacttctataccagtactggtaaacgtaagcctgatcaagtcattatcttc
agggatggggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaata
attgaggcatgcaagtttcttgacgaaaactggtctccaaagtttacactgattgttgca
cagaagaatcatcataccaaattttttgtgcctggatctcaaaataacgttcctcctggt
actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac
gctggaatgattggaactacaaggcctacacattatcatatccttcatgatgagataggc
ttctctgctgacgatcttcaggaattggtccactccctttcctatgtctaccagaggagc
actacagccatatcagtcgttgcacccatttgctacgcgcatctcgctgctgctcaggtc
agccagttcatcaagttcgacgagatgtcggagacgtcgtcgagccatggtggccatacc
tcggcgggcagcgctccggtgcccgagctgcctcgcctgcataacaaagtcaggagctcc
atgttcttctgctga
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