Oryza glaberrima (African rice): 127768669
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Entry
127768669 CDS
T08853
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127768669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127768669
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127768669
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127768669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
Motif
Other DBs
NCBI-GeneID:
127768669
NCBI-ProteinID:
XP_052150254
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Position
1:989353..990873
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AA seq
350 aa
AA seq
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MFCSTTTTTTTSSPETAEMAEQNKRSSSAAENGHAGGKKARANVEVKQEEEEAEEGEMSQ
EEESAKTGPLVVATAMDDPQIDVRIAVGLLHCHACLLPLKPPVFKCEAAHVVCSGCRGNH
GQLCRRAAAYAHCAELDAIVGAAKVACAHAPYGCDSYVVYGAATEHQRACPCAPCSCPDP
GCGFRGSPAALLGHFATDHPWSVTQISYAKPCRLAVPLPRRCHVLVGEDDRAMFLVVSPS
PCGVGVGAAVCVACVRANGDDAAAAQYKCKLWVEVPTNSDNMVMMTSKVRSSDLSGGFPA
AEQGMFLVVPPELLHEVSGETPILSIRIDRAAPAIAKPTTPRARSLRRLQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttctactactaccaccaccaccacatcatctccggagactgcagaaatggct
gagcagaacaagaggagctcgtcggcggcggagaacggccacgccggcggcaagaaggcg
agggccaacgtcgaggtgaagcaggaggaagaggaggcggaggaaggagagatgagccaa
gaagaagagagcgcaaagacggggcctctggtggtggccaccgccatggacgacccgcag
atcgacgtcaggatagccgtcggcttgctgcactgccatgcctgcctcctccccctcaag
cctcccgtcttcaagtgcgaggcggcgcacgtggtgtgctccggctgccgcggcaaccac
ggccagctctgccgccgcgccgccgcgtacgcccactgcgccgagctggacgccatcgtc
ggcgccgccaaggtggcgtgcgcccacgcgccgtacggctgcgacagctacgtcgtgtac
ggcgcggccaccgagcaccagcgcgcgtgcccgtgcgcgccctgctcctgcccggacccc
ggctgcggcttccgcggctcgccggcggcgctcctcggccacttcgccaccgaccacccc
tggtccgtcacgcagatcagctacgcgaagccgtgcaggctcgccgtgccgctgccccgg
cggtgccacgtcctcgtcggggaggacgaccgcgccatgttcctggtggtgtccccgtcc
ccgtgcggcgtcggcgtcggcgcggcggtgtgcgtggcgtgcgtccgggcgaacggcgac
gacgcggcggcggcgcagtacaagtgcaagctgtgggtggaggtgccgaccaacagcgac
aacatggtgatgatgacgtccaaggtgaggagcagcgacctctccggcgggttcccggcg
gcggagcaggggatgttcttggtggtgccgccggagctgcttcacgaggtgtccggcgag
acgccgatcctcagcatccgcatcgatcgagctgctcccgccattgccaagcccaccact
ccacgagccaggtccctgaggagattgcagtga
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