Oryza glaberrima (African rice): 127768676
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Entry
127768676 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127768676
KO
K10895
fanconi anemia group I protein
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127768676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127768676
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
127768676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S4
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
127768676
NCBI-ProteinID:
XP_052150263
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All DBs
Position
3:complement(12142823..12148757)
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AA seq
1325 aa
AA seq
DB search
MSASAAAAAAYGTPPSQQPPPPTAESVLRVASRDPSAAAPLLQALPPDGLDDVLSSLSPA
SPPNHLALLPAVLALSPSPTAAAAALSALLSAPSWPSPTLLAVASLLRDLPAAYRHRVPA
FVAKVLSLLPAADAQDLPALAYQLLLLASKLLHPRAVLSGLLRFFGGHRGARLRAPPSIA
RQVEGTVLMHVAFAVKQDPALAREVVAAVKADAAGTLSGFAVAVLLSVARVRRFNDAAVG
VLRDAVITSRRDYRISRRCKWLPECLKGECARAANCVEKALLKAVGESIGGREHVVPSIV
QVGFLLLEASDSDRKEEVGSNEGVMSTEEVGVNMLKSLFDIHGMARTEIIEQCKFRILSV
KPSQSLPVIRLLGGLVRTHPFQMLEYISHLKELLDYFAFLNDKISIGLINCILPLTKFSR
DLKDYIILVIRKAMFKREDAVRIAATNAIVELIIAENKHKRTEANPFQDSSSQPSSSQQP
ETHLEIGGGLFQELSGLLRRCFMQQARVKEVLYNGLIQIVTSDPSIAENVLDFLWPHFLN
YYTEHAECPLKIDSCFKIENAKVSIVEPIDCLLSCISCILQVQQNSKCEQPRDAYWKCFG
FAPSQDNEVGRLSSSDLFVKALSNTQKYLRKCLAEDQRGQTQETCSLSSHLDTAHCHNFA
MIGIIEVFIGFTASKLEKVADEQKEMLEKEILDLIDAHSSFERKKSKNKEKIAQRAGNSS
DSTAKQTNGPKEYYSATLQKLNERRETFMDSSLYELVRVCVKQCDADNLEKCSQRPTQSK
LNQCHSLLSFVLKACYRMFKSLAAKGSGATTGNVRAVLYEDVKKLVGPMMQLIWWIMLDS
KQENGGTKRNLTQGKKHMDSKKDQLYLALTCLTEMSKLSVPEDHPGDIIDVLVSSAPPNI
EDMVHCSQLLGRNDTDPNTGSVHVFLNILKMLYVRVLSQSLPRESEAVTELILGISRKLH
HEQSHLVGHWAASLCQKTILQNPSIAQEMVKLAIHLMIAPDDLVLVHEMTAELKLITNGE
EDSRDSSETFPVINCKTKNSLAAVFLQMVESSLTELDWVIGKLKVMLALAYDSANIDEDD
QPADERTQRLYLEEALYSRSTSVVHVLSSFAHTSLKDSQAEQFLKLTAKLYKLLARMAKS
QIAPKGYKQVMPGLKFQKLAEVTCRMLTAPLYVFVALVQENQQASKRGILARIKRESKCI
PDLIFQIEDYEKYLIQLSKLTKVNLLRHAKRSVARDFKIQSKDELERNSTAARAASSENM
PEEDAEGPDAPLETNGDEDPQASARSDNTVEDSESDEEEERVLARRKRAKTNSIVQDSDE
EAEDE
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtccgccgccgccgccgccgcctacggcacgcccccgtcgcagcaaccccct
ccccccaccgcggaatccgtcctccgcgtcgcctcccgcgacccctccgcggcggcgccc
ctcctccaggcgctcccgcccgacggcctcgacgacgtcctctcctcgctctcccccgcc
tcgccgccgaaccacctcgccctcctccccgcggtgctcgccctctccccctcccccacc
gcggcggccgccgcgctctccgcgctcctctccgcgcccagctggccatcgccgaccctg
ctcgccgtcgcctccctcctccgcgacctccccgcggcctaccgccaccgcgtcccggcc
ttcgtcgcgaaggtcctctccctcctccccgccgctgacgcccaggacctccccgcgctc
gcctaccagctcctcctcctcgcctccaagctgctccacccgcgagccgtcctctcgggc
ctcctccgcttcttcggcggccacaggggcgcccgcctgcgcgcgccgccgtccatcgcg
cggcaggtggaggggaccgtgctgatgcacgtcgccttcgcggtcaagcaggaccccgcg
ctggcgagggaggtcgtggccgccgtcaaggccgacgcggcggggacgctcagcgggttc
gccgtggcggtgctgctgtccgtggcccgcgtgcggaggttcaacgacgccgcggtgggc
gtgctccgggacgccgtcatcacgtctcgccgggattatcggatatcgaggcgctgcaaa
tggttgccggaatgcctgaaaggggagtgcgcccgggctgctaactgcgtggagaaggca
ttactgaaagctgttggcgagagcattggtggaagggagcatgttgtgccaagcattgtt
caagtgggttttctcctgttggaggcctcagatagtgacagaaaggaggaagttggctcc
aatgaaggggttatgagcactgaagaagtaggtgttaatatgctcaagtcattgtttgat
atccatggaatggcacgaactgagataatcgagcagtgcaagttccggattctctccgtg
aagccttctcaaagtttaccagtcattagactgcttggaggtttagttcgtactcatcca
tttcaaatgcttgaatacatttcgcaccttaaagaattgctggactattttgcattcttg
aatgacaagatatcaattggtctgatcaactgtatcctgccactcacgaagtttagccgt
gatctaaaggattacataatattggttataaggaaggccatgttcaagcgggaggatgct
gtgcggattgctgccacaaatgctattgttgaactgattattgcagagaacaagcataag
agaaccgaagcaaatccttttcaagactcatctagtcaaccaagctctagccagcaacct
gaaacacatttagagattggtgggggtctctttcaagaactgagtggattacttcgcaga
tgtttcatgcagcaggctagagtcaaagaggtcttgtacaatggactcatacaaattgtt
acctcagatccgtctattgctgagaatgtccttgatttcctttggccgcacttcctaaac
tattacacagagcatgcagaatgtccccttaaaattgactcgtgttttaaaatcgagaat
gccaaagtaagcattgtggaaccaatagattgcctactatcatgtatctcatgtattctt
caagttcaacaaaatagtaaatgtgaacaaccacgagatgcatattggaagtgcttcggg
tttgctccttcgcaggataatgaggttggaagattatcatcaagtgacttattcgtgaaa
gctttatcgaacacccagaagtacttgaggaaatgtcttgcagaagatcaacgagggcag
acccaagaaacctgttctctttcttcacatttggacacggctcattgccataattttgct
atgattggaatcattgaggtttttatcggttttactgcttcaaaactagagaaagtagct
gatgagcaaaaggaaatgttagaaaaagaaatactggaccttattgatgcacatagtagc
tttgagagaaaaaaaagcaagaataaggagaagattgcgcaaagagcagggaattcaagt
gattctactgcaaagcagacgaatggacccaaggagtattacagtgcaacactgcagaaa
ttaaatgaaaggagggagacctttatggattccagtttatatgaacttgtaagggtgtgt
gtcaagcagtgtgatgctgataaccttgaaaaatgcagtcagcgtcctacccaatctaaa
ttgaaccaatgccacagtctattatcttttgttctgaaagcctgttatagaatgttcaaa
tcacttgcagccaagggaagtggagcgactactggaaatgtaagagctgtgctgtatgaa
gatgtaaaaaagttagtggggccaatgatgcagcttatatggtggataatgctagattca
aagcaagaaaatggtggaaccaagaggaacttgacccaagggaagaaacacatggatagc
aaaaaggaccaactgtatctagcattgacatgcctaacagaaatgtctaagctaagtgtt
ccagaagatcatcctggtgatattattgatgtcctggtatcatcagctccgccaaatata
gaagatatggtgcattgcagccagcttcttggcaggaatgacactgatccaaatacagga
agtgtccatgtttttctgaatatattaaagatgttatatgttcgagttctttcccagtca
ctaccacgtgaatctgaggctgtaactgaactgattctcggcatatcaagaaagctacat
catgaacaaagtcaccttgttggacattgggctgcaagtttgtgtcaaaaaactattctc
cagaatccaagcattgcacaggagatggtaaaacttgctatccatcttatgatagctcca
gatgatctggttctcgtgcatgaaatgactgcagagttgaagttgataaccaatggagaa
gaggactcgagagattcgtcagagacatttcctgttataaattgtaaaacaaagaattca
cttgctgctgtgtttcttcaaatggttgaatcatctcttactgagctggattgggtaatt
ggtaagcttaaggtaatgcttgcattagcatatgattctgctaatattgatgaggatgat
caacctgctgatgaaaggacgcaaaggctatatttagaggaagcactgtactcaagatca
acatccgtagttcatgtcctttcgtcttttgcacatacgagccttaaggattctcaggca
gaacagtttctgaaactgactgccaagttgtacaagctattggctcgcatggccaagtct
cagattgcacctaagggatacaaacaagtcatgccaggtctcaagtttcagaaattggca
gaagtaacttgcaggatgctgactgctccactttacgtcttcgtcgctttagttcaagag
aatcagcaagcgtcaaaaagaggaatcctggctaggatcaaaagagagagcaaatgcatc
ccagatcttattttccagatcgaagattacgagaagtatttaatccagctgagcaagctt
acaaaggtgaacctcttgaggcatgccaagcgcagcgtggcaagagactttaagattcaa
tcgaaggacgaactggaaaggaactctactgcagccagagctgcgtcatctgaaaatatg
cctgaggaggacgcggaaggtccagatgctcctcttgaaacaaatggtgatgaagatcca
caggccagtgcacgcagtgataacacagttgaagattctgaatctgatgaagaggaggaa
agagtcttagcaagacggaaaagagctaagacgaacagcattgtccaggattctgatgag
gaagcagaagacgaatag
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