Oryza glaberrima (African rice): 127768914
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Entry
127768914 CDS
T08853
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit-like
KO
K03231
elongation factor 1-alpha
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127768914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127768914
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127768914
03012 Translation factors [BR:
ogl03012
]
127768914
04131 Membrane trafficking [BR:
ogl04131
]
127768914
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127768914
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127768914
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127768914
Translation factors [BR:
ogl03012
]
Eukaryotic type
Elongation factors
127768914
Membrane trafficking [BR:
ogl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
127768914
Exosome [BR:
ogl04147
]
Exosomal proteins
Proteins found in most exosomes
127768914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
FlpD
Motif
Other DBs
NCBI-GeneID:
127768914
NCBI-ProteinID:
XP_052150544
LinkDB
All DBs
Position
3:3828003..3837072
Genome browser
AA seq
900 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVEKKDPTGAKVTKAAAKKKLPPYSTMGKEKTHINIVVIGHVDSGKSTTTGHL
IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYC
TVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQ
MICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN
LDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVT
FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAAS
FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDA
GMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKKK
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagacgcacatcaacatcgtggtcattggccacgtcgactccggcaag
tcgaccaccacgggccatctgatctacaagcttggaggtatcgacaagcgtgtgatcgag
aggttcgagaaggaagccgctgagatgaacaagaggtccttcaagtacgcgtgggtgctc
gacaagctcaaggccgagcgtgagagaggtatcaccatcgatatcgccctgtggaagttc
gagaccaccaagtactactgcacggtcatcgatgcccctggtcaccgtgacttcatcaag
aacatgatcacgggtacctcccaggctgactgtgccgtgcttatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacccgtgagcacgctcttcttgct
ttcactcttggagtgaagcagatgatctgctgctgcaacaagatggatgccaccactccc
aagtactccaaggcccgttatgatgaaatcgtgaaggaagtctcatcctacctgaagaag
gtcggctacaatcctgacaagattcccttcgttcccatctctgggtttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggccccaccttgcttgaggctctt
gaccagatcaacgagcccaagaggccatcagacaagcccctgcgtcttccccttcaggac
gtgtacaagatcggtggtattggcaccgtgcctgttggtcgtgttgagactggagtcctc
aagcctggtatggtggtgacctttggtcccagtggcctgaccactgaggtcaagtcggtt
gagatgcaccacgaggctctccaggaggctcttcctggtgacaacgtcgggttcaacgtg
aagaacgttgccgtgaaggatctgaagcgtgggtacgtggcctccaactccaaggatgac
cctgccaaggaggctgccagcttcacctcccaggtcatcatcatgaaccaccctgggcag
atcggtaacggctatgcgccagtgctggactgccacacctcccacattgctgtcaagttt
gctgagctggtgaccaagatcgacagacgatctggcaaggagctcgagaaggagcccaag
ttcttgaagaacggtgatgctggtatggtcaagatgattcctaccaagcccatggttgtg
gagaccttctctgagtaccctcctcttggtcgttttgcggtgcgtgacatgaggcaaacg
gtggctgttggcgtcatcaagaacgtggagaagaaggacccaaccggtgccaaggtgacc
aaggctgccgccaagaagaagctacctccttattcaaccatgggtaaggagaagacgcac
atcaacattgtggtcattggccacgtcgactccggcaagtcgaccaccacgggccatctg
atctacaagcttggaggtatcgacaagcgtgtgatcgagaggttcgagaaggaagccgct
gagatgaacaagaggtccttcaagtacgcgtgggtgctcgacaagctcaaggccgagcgt
gagagaggtatcaccatcgatatcgccctgtggaagttcgagaccaccaagtactactgc
acggtcatcgatgcccctggtcaccgtgacttcatcaagaacatgatcacgggtacctcc
caggctgactgtgccgtgctcatcattgactccaccactggtggttttgaggctggtatc
tccaaggatggccagacccgtgagcacgctcttcttgctttcactcttggagtgaagcag
atgatctgctgctgcaacaagatggatgccaccactcccaagtactccaaggcccgttac
gatgaaatcgtgaaggaagtctcatcctacctgaagaaggtcggctacaaccctgacaag
attcccttcgttcccatctctgggtttgagggtgacaacatgattgagaggtccaccaac
cttgactggtacaagggccccaccttgcttgaggctcttgaccagatcaacgagcccaag
aggccatcagacaagcccctgcgtcttccccttcaggacgtgtacaagatcggtggtatt
ggcaccgtgcctgttggtcgtgttgagactggagtcctcaagcctggtatggtggtgacc
tttggtcccagtggcctgaccactgaggtcaagtcggttgagatgcaccacgaggctctc
caggaggctcttcctggtgacaacgtcgggttcaacgtgaagaacgttgccgtgaaggat
ctgaagcgtgggtatgtggcctccaactccaaggatgaccctgccaaggaggctgccagc
ttcacctcccaggtgatcatcatgaaccaccctgggcagatcggcaacggctatgcccca
gtgctggactgccacacctcccacattgctgtcaagtttgctgagctggtgaccaagatc
gacagacgatccggcaaggagctggagaaggagcccaagttcctcaagaacggtgatgct
ggtatggttaagatgattcccaccaagcccatggttgtggagaccttctctgagtaccct
cctcttggtcgttttgcggtgcgtgacatgaggcaaacggtggctgttggcgtcatcaag
aacgtggagaagaaggacccaaccggtgccaaggtgaccaaggctgccgccaagaagaaa
tga
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