Oryza glaberrima (African rice): 127768996
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Entry
127768996 CDS
T08853
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127768996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127768996
03036 Chromosome and associated proteins [BR:
ogl03036
]
127768996
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
127768996
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127768996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
127768996
NCBI-ProteinID:
XP_052150630
UniProt:
I1P7N4
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All DBs
Position
3:2734424..2740672
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AA seq
379 aa
AA seq
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MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSE
QHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQAPTSKKKKRGARAVGPDK
GGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSILPADPDNPNAQQYDEKNI
RRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIEDLQTELVGLKSRIEKKNTYLQE
LQDQFVGMQKLIQRNEQLYGSGNIPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFN
STPFELHDDSFVLKAMSSCGEEQIDGIHDLISNGGESSSMPNIYRQQVQQPARSTNGTAR
LPSSPPIPGILKGRVKHEH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgtcgcccaccggccggacgacgacggcggccgcgccgcctcgacgttc
cagcgcccgccgcagccggccggcgcgcggccgtccctggccacgccgccgccctcgggc
ggagcgcaatccgcttcgacgagcggcgggagcgcgggctccccgtccagccgcagcgag
cagcatgtccccgcagccgcaggcatggcggcgggggcggcggcggcctctactccgatt
agtgagaataccttcctccgcctcaacgaccttgacatccacggcgacgatgcgccttcc
tcacaggctccaacgagcaagaagaagaagagaggagcacgagcagttggtcctgacaaa
ggtggcagggggctgcgccagtttagtatgaaagtttgtgagaaagttgaaagtaaaggg
agaacaacatacaacgaggtggcagatgaacttgttgccgaatttgcagatcccaataac
agcattttgccagcagatccagataatcccaatgcacaacaatatgacgagaaaaatata
cggagaagggtttatgatgctctgaatgttctgatggctatggagattatatctaaagat
aaaaaggaaattcagtggaaggggttgcctcgaaccagtataaatgatattgaagatttg
cagacggaacttgtaggactgaaaagtaggattgagaagaaaaatacatatttgcaggag
ctgcaagaccaatttgtaggtatgcaaaagttgatacaaagaaatgaacagctatatggt
tcaggaaacattccctcgggtggagttgcattaccatttatccttgttcagacacggcct
catgcaactgtggaagttgaaatatcagaagatatgcaacttgtacattttgactttaat
agcacaccatttgagttgcatgatgactcatttgtactgaaagcaatgagttcttgtgga
gaagaacaaatcgacggtattcatgatctaatttcaaatggaggtgagagctcaagcatg
ccaaatatttataggcagcaagtgcagcaacctgcaagatcaactaatggtacagctaga
ttgccaagctcaccccctattccaggaatactgaaagggcgagtgaagcacgagcattag
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