Oryza glaberrima (African rice): 127769018
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Entry
127769018 CDS
T08853
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like isoform X1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00541
Biosynthesis of various nucleotide sugars
ogl01100
Metabolic pathways
ogl01250
Biosynthesis of nucleotide sugars
Module
ogl_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
127769018
Enzymes [BR:
ogl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
127769018
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
NifZ
Motif
Other DBs
NCBI-GeneID:
127769018
NCBI-ProteinID:
XP_052150661
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Position
3:8914062..8917344
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AA seq
678 aa
AA seq
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MAKMAAYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSP
NFKFVKGDIASADLVNYLLTTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA
CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY
GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEV
VLHKGEVGHVYNIGTMKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKL
KKLGWAERTLWEEGLKKTIEWYTNNPDYWGDVAGALLPHPRMLMTPGVERHNWTDEIKSL
STSPDEAKESSTAVPAATAKSTSSAPQKASYKFLIYGRTGWIGGLLGKICEKQGIPYEYG
KGRLEERSQLLQDIRNVKPTHVFNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVCR
EQGLLMINYATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSYYSKTKAMVEELLQEYDNVC
TLRVRMPISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNFT
NPGVVSHNEILEMYKKYLNPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKSEFPELLSI
KDSLVKYVFEPNRKVPAN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatggcggcttacgagcccaagaacattcttataaccggcgctgctggtttc
atcgcatcacatgtggcgaaccgcctagtcaggaactatccgcactacaagattgttgtc
ctcgacaagctcgattactgttccagcctgagcaatctcaacccttcacgtccgtcgccg
aatttcaagtttgtcaagggtgacattgcaagtgctgatctggtgaactaccttctcaca
actgagtcaattgacactatcatgcactttgctgctcagactcatgtggataattcattt
ggcaattcctttgagtttacaaagaacaatatttatggtacccacgtccttcttgaggcc
tgcaaggttactggtcagattagaagatttattcatgtgagtactgacgaggtgtacgga
gaaactgatgaggatgctgtggttggcaaccatgaggcctcacagctgcttccaacaaac
ccatattcagctacaaaagctggggctgagatgcttgtgatggcttatggaagatcttat
ggccttcctgtgattacaactcggggcaacaatgtatatgggccaaatcagttccctgag
aagctcattcccaaatttattcttttggcaatgagaggcttgccccttcccattcacggt
gatggctcaaatgtcagaagctatctgtattgtgaggatgttgctgaagcttttgaggtg
gttcttcacaaaggagaggttgggcatgtgtacaatattggtactatgaaggaaaggagg
gtgattgatgtggccaaggacatatgcaagctctttggcttggacaccgagaaggtcatc
agatttgttgagaacaggcctttcaacgaccagagatacttcttggatgatcagaagctg
aagaaattgggatgggcagagcgcacactatgggaagaggggttgaagaaaacaattgaa
tggtacactaacaatcctgattactggggagatgtcgcaggtgccttgctccctcatcca
aggatgttgatgacacctggagttgaaaggcataactggactgatgagatcaaatctctt
tccacttcaccagatgaagctaaggaatctagcactgcggttcctgcagccactgccaaa
agcaccagcagtgcccctcaaaaggcctcatacaagttcttgatatatggtaggactgga
tggattggtggtctacttggtaagatatgtgagaagcaagggattccatatgagtatggg
aaaggacgcctggaagagcgctctcagctcttgcaggacattagaaatgtgaagccaact
catgttttcaatgctgctggtgtcactgggaggccaaatgttgactggtgcgagacccat
aaacaggatactatccgcaccaatgttgttggcaccttgaaccttgctgatgtttgtcgt
gagcagggcttgctcatgattaattatgctacaggttgcatatttgagtatgatgctaag
caccccgaaggatcaggaattggttttaaagaggaagataagcccaactttactggttca
tattattccaaaactaaagctatggttgaagagctgttgcaagaatatgacaacgtctgt
acgcttcgagtcaggatgcccatatcatcagatttgagcaacccccgtaacttcatcaca
aagatagctcgttatgacaaggtggtaaacatccccaacagtatgacaattttggatgag
cttttgcccatctccattgagatggcgaagcgggactgcaggggcatatggaacttcacc
aatcctggggttgtcagccacaacgagatcctggagatgtacaagaaatacctcaacccc
gacttcaagtggaccaacttcactcttgaggaacaggccaaggttatagttgcaccaaga
agtaacaacgaaatggatgcatcgaagttgaagtccgagttccccgagctactgtccatc
aaggattctttggttaagtatgtttttgagccaaacaggaaggttcctgctaactga
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