Oryza glaberrima (African rice): 127769549
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Entry
127769549 CDS
T08853
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127769549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127769549
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
127769549
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127769549
Prokaryotic type
127769549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
127769549
NCBI-ProteinID:
XP_052151104
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All DBs
Position
4:complement(30454775..30459463)
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AA seq
303 aa
AA seq
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MAPPLPPTAPKTIADYLIRPSKRLRPTSPAPAAAASAPLSSSSLSPEQRRRADTNLALAR
ARRHLRLAESKASGGTAKLEELLVEETWLEALPGELHKPYALELCRFVAHERLHSPVPVY
PPPHLVFHALHATPFHRVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLANIFKELQK
DLGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEQFTDAVIKTISLKKSGI
VFILWGNSAQAKTRLIDETKHHILKSAHPSGLSASRGFFGCRHFSKTNQILERLGLSAID
WQL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcctctccctcccaccgcccccaaaaccatcgccgactacctcatccgcccc
tccaagcgcctccgccccacctctcccgctcccgccgccgctgcgtcggcccccctctcc
tcctccagcctctcgccggagcagcgccgccgcgccgacaccaacctcgcgctcgcccgg
gcgcgccgccacctccgcctcgccgagtccaaagcgtcgggcggcaccgcgaagctggag
gagctgctcgtcgaggagacgtggctggaggcgcttcccggggagctgcacaaaccctac
gcgctcgagctctgccgcttcgtcgcccacgagaggttgcatagcccggtgcccgtctac
ccgccgccgcatctagtcttccacgcgcttcacgccaccccgttccaccgtgttaaggcc
gtcatcatcgggcaggatccataccatggacctggtcaggcgatggggttgtctttctca
gtaccagaggggatcaaaattccttctagcttagcaaacatatttaaagagctgcaaaaa
gatctaggttgcaccgtgccttcacatggaaacttggaaagatgggctgtgcagggtgtt
cttatgctcaacactgtattaactgtgagagaacatcaagccaattcacatgccaagaaa
ggatgggagcaatttactgatgctgtcattaagacaatatcactgaagaaatctggaata
gtctttattctctggggaaactcagctcaagcaaagacaagattgattgatgaaacaaaa
caccacattttgaaatccgctcatccatcagggctgtctgcaagcagaggtttctttgga
tgcaggcacttttctaaaacgaatcagatcttggagaggctgggactatctgccattgat
tggcaactctag
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