Oryza glaberrima (African rice): 127769583
Help
Entry
127769583 CDS
T08853
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1-like
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127769583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127769583
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127769583
Enzymes [BR:
ogl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
127769583
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127769583
Chaperones and folding catalysts [BR:
ogl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
127769583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
127769583
NCBI-ProteinID:
XP_052151136
LinkDB
All DBs
Position
4:complement(1113594..1115596)
Genome browser
AA seq
123 aa
AA seq
DB search
MASSATETETVRASHILIKHEGSRRKASWKDPDGRVISATTRADAAARLADLRDQILSGR
ANFADLAARHSDCSSARRGGDLGTFGRRQMQKPFEDATFALKVGEMSDTVDTDSGVHIIL
RTA
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggcgacggagacggagacggtgagggcgtcgcacatcctgatcaagcac
gagggctcccgccgcaaggcctcctggaaggatcccgacggccgcgtcatctccgccacc
acgcgcgccgacgccgccgcgcgcctcgccgacctccgcgaccagatcctctccggccgc
gccaacttcgccgacctcgccgcccgccactccgactgctcctccgcgcgccgtggcggc
gacctgggcacttttgggaggaggcagatgcagaaacccttcgaagatgcgacatttgct
ctcaaggttggtgagatgagtgacactgtggacactgacagtggtgttcacatcatcctg
cgcactgcttaa
DBGET
integrated database retrieval system
