Oryza glaberrima (African rice): 127769805
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Entry
127769805 CDS
T08853
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127769805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogl04040
]
127769805
Ion channels [BR:
ogl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127769805
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
127769805
NCBI-ProteinID:
XP_052151410
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Position
4:28970953..28977262
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AA seq
725 aa
AA seq
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MFDSAHKAQYIDGQREMFKRLDESSPRSSVPSEVGGRSTLKFSMPSFGYDSFNPVRSFLS
GVRKGSGRLKSLRQSLTSGAPKTAFAEDLKSFKKTIFDPQEKFLFQMNWFCFLSCVFAVA
VDPLFFFLPIIDGDDKSSCIGIDKKLAVTSTIIRTILDLVYLIRVFLQFRTAYVAPSSRV
FGTGELVIDPMRIAIRYLKSYFVMDFFALLPLPQIVVWRYLHTLDGPDVPSTKNALVWVV
LFQYIPRLLRIFPVTKDLKRTAGVFIETAWLGAAYYLLWFMLAGHNVGTLWYFLTIERED
SCWRSNCHSNDGCNKSYLYCSDNHTGNYTSWLSKRTELLSACSTNSFQFGIFEQALVSGI
LRPGNFISKICYCFWWGLQNLSTLGQGLQTSIYPGEVLFSIAICVIGLILFALLIGNMQT
YLQSVAIRLEEMRVKKRDAEQWMHHRSLPPQIRERVRRYERYRWLETRGVDEENLVQTLP
KDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPTLYTENEYILREGDPVDEMHF
ILHGCLESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTVKALTEV
EAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQHWRTWAACFIQAAWRRYYKRKMAEQH
RKEEEAANRQSSSSSHHPSLAATIYASRFAANALRGVHRLRSRASPTIVRLPKPPEPDFA
VDEAD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattctgcgcacaaagctcaatacatcgacggacaaagagaaatgtttaagaga
ttggatgagtcaagccctaggtcatctgtaccttctgaagtgggagggaggagcaccctg
aagtttagcatgcctagttttggttatgattcatttaatcccgtaagatctttcttgtca
ggggtgagaaagggttctggaagacttaaatcacttcggcaatcacttacatctggtgct
cctaagacagcttttgcggaagatcttaaatcttttaagaagactatatttgatccccag
gaaaagtttctctttcaaatgaattggttttgcttcctatcatgtgtttttgctgttgcc
gtggatccactatttttcttcctacccattatcgacggcgatgacaagtccagttgcatt
ggtattgataaaaaattggcagtgacatcaacaataatacggacaattctggatctggtc
tatcttatacgtgtatttcttcaatttcgcactgcttatgttgctccatcttctcgagtg
tttggaactggtgagcttgtgattgatccaatgaggattgctattcggtacttaaagagt
tattttgtaatggacttctttgctttgctaccacttccacagattgttgtttggagatat
ctccatactttggatggcccagatgtaccgtcaacaaaaaatgcattggtttgggttgta
ttgtttcaatatattccaaggttgctacggattttccctgtgaccaaagatttgaaaagg
acggctggtgttttcattgaaactgcttggcttggtgctgcttactatcttctatggttt
atgctggctggtcataatgttggtactttgtggtattttttgaccatagagcgggaagat
tcttgctggcgctcgaactgtcatagcaatgatggctgtaataaaagctacctgtactgt
agtgataatcatactggcaactataccagttggcttagtaagagaacagaacttctcagt
gcatgcagtactaattctttccaatttggtatttttgaacaagcgctggtgtctggaata
cttcgtccaggaaattttatctctaaaatctgctattgcttctggtgggggctacaaaat
ctaagtacccttggtcaagggcttcaaacaagcatatatcctggagaggtgttattctct
atcgcaatatgtgttattgggctaattctttttgctctcctcatcggcaacatgcagacc
taccttcaatcagttgctatacggcttgaagagatgagagttaagaaacgtgatgctgag
cagtggatgcatcatcgttcactgcctcctcaaataagagagcgagtaaggagatatgaa
cgctataggtggttggagaccagaggagtagatgaagaaaatttggttcaaacccttcca
aaagaccttcggagggacattaagcgccatctctgtttgggtttagtgaaaagggtacct
ttgtttgagaatatggatgaaagattgctggatgcaatatgtgagaggttaaggcctaca
ctatacactgaaaatgaatacattttgagagaaggcgatcctgtggacgagatgcatttc
atcctccatggctgcttggagagtgagaccaccgatgggggccgaagtggattctttaac
aaggtccagttaaaggagggcgctttctgcggtgatgagctgctcacatgggcattggat
cctaaatctgctgctaacttcccagcttcaactaggacagtgaaagctcttactgaggtt
gaggcatttgcgttgtgtgctgaggagctgaaatttgtggccagtcagttcaggaggctc
cacagtaggcaagttcagcacacgttccggttctattcccagcactggaggacatgggcg
gcctgtttcattcaagcggcatggcgccgctattacaagaggaagatggccgagcagcat
cgcaaggaagaagaggctgcaaaccggcaaagcagcagcagcagccaccaccctagcctc
gcagcaaccatctacgcatctcgctttgcagctaatgcactccgaggagttcacaggctc
agaagcagggccagcccgacaattgtgagattgccaaagcctccagaaccagattttgcc
gtcgatgaagctgactaa
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