Oryza glaberrima (African rice): 127769860
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Entry
127769860 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127769860
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127769860
09123 Folding, sorting and degradation
03018 RNA degradation
127769860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127769860
03041 Spliceosome [BR:
ogl03041
]
127769860
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127769860
mRNA degradation factors
5'-3' decay
Lsm complex
127769860
Spliceosome [BR:
ogl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127769860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
127769860
NCBI-ProteinID:
XP_052151482
LinkDB
All DBs
Position
4:complement(16303908..16309113)
Genome browser
AA seq
90 aa
AA seq
DB search
MSTGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
QLKNKYGDAFIRGNNVLYISTSKRTLTDDA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggcggcggcggcggaggggcggtgaagacgccctcggacttcctcaagtcg
atcaggggacgccccgtcgtcgtcaagctcaactccggcgtcgactaccgaggtattttg
gcttgcctggatgggtatatgaacattgcaatggagcaaacggaagagtatgtgaatggc
caactcaagaacaagtatggtgatgccttcataagaggcaacaatgttctatacatcagc
acttcgaagaggacccttacggatgacgcatag
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