Oryza glaberrima (African rice): 127769974
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Entry
127769974 CDS
T08853
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127769974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127769974
04147 Exosome [BR:
ogl04147
]
127769974
04090 CD molecules [BR:
ogl04090
]
127769974
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127769974
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127769974
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127769974
CD molecules [BR:
ogl04090
]
Proteins
127769974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_22
APS_kinase
Zeta_toxin
SbcC_Walker_B
AAA_30
Cytidylate_kin
nSTAND1
Motif
Other DBs
NCBI-GeneID:
127769974
NCBI-ProteinID:
XP_052151593
LinkDB
All DBs
Position
4:21032741..21037125
Genome browser
AA seq
1271 aa
AA seq
DB search
MGDKERPSFLRLVRYADAHDRCLMALGVLGSFGDGMMQPLSMLVLGDIVNSYGGAGGAGS
ARSAFSSGAVDKFALRLLYVAVAVGACSFLEGLCWTRTAERQASRMRRLYLEAVLSQEVA
FFDAAPSSPSSPQAQAQATTFRVISTVSDDADAIQNFLGEKLPMVLANATLFFGALAVSF
VFAWRLALAGLPFTLLLFVTPSVLLAGRMAAAAGEARAAYEEAGGIAQQAVSSIRTVASY
TAERRTVERFRGAVARSAALGVRQGLIKGAVIGSMGVIYAVWSFLSWIGSLLVIHLHAQG
GHVFVASICIVLAGMSIMMALPNLRYFIDATAAASRMQEMIEMLPPLEGAEKKGATMERI
RGEIVFKDVHFSYPSRPDTLVLNGFNLTISEGATVGLVGGSGSGKSTVISLLQRFYSPDS
GEISMDDHGIDTLNVEWLRSQIGLVSQEPVLFATSIRENILFGDETASLKQVVAAAKMAN
AHEFIVKLPHGYETHVGQFGTQLSGGQKQRIAIARALVRDPRILLLDEATSALDAESERT
VQDALDRASVGRTTVIVAHRLSTLRKADTIAVLDAGRVVEAGTHDELLGMDDGGEGGVYA
RMVHLQKAPPVAAREERHRAVDVVESEMVSFRSVEIMSAVSATEHRPSPAPSFCSVEHST
EIGRKLVDHGVARSRKPSKLRLLKMNRPEWKQALLGCVGAVVFGAVLPLYSYSLGSLPEV
YFLADDGQIRSKTRLYSFLFLGIAVVCITANIVQHYNFAVMGERLTERVRGQMLAKILSF
EVGWFDEDENSSAAVCARLATQSSKVRSLVGDRMCLLVQAGATASLGFSLALAVSWRLAT
VMMAMQPLIIASFYFKKVLMAAMSKKAKKAQVQGSQLASEAVVNHRTITAFSSQRRMLRL
YEAAQQGPKKDNVAHSWFSGFCLCLCQFSNTGSMAVALWYGGKLMAKGLITPTHLFQVFF
MLMTMGRVIADAGSLTSDLAQGGDAVRSVLDTLDREPTIKDDDNDNERKKKKRKEIKGAI
EFKNVHFSYPTRPEVAVLAGFSLEIGAGKTVALVGPSGSGKSTVIGLIERFYDAQRGSVL
VDGEDIRSYSLARLRSQVALVSQEPTLFSGTIRDNIAYGAAEEHATEDEVARAAALANAH
GFISAMERGYDTRVGERGAQLSGGQRQRIALARAVLKDARILLLDEATSALDAASERLVQ
DTVDRMLRGRTCVVVAHRLSTVEKSDTIAVVKDGRVAERGRHHELLAVGRAGTYYNLIKL
QHGRSPCLSPM
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaggagaggccgtcgttcctgcggctggttcgctacgccgacgcgcacgac
cggtgcctgatggcgctgggcgttctgggcagcttcggcgatggcatgatgcagccgctg
tcaatgctggtgctcggcgacatcgtcaacagctacggcggcgccggcggcgccggcagt
gcccggagcgccttcagctccggcgccgtcgacaagtttgcgcttcggttactgtacgtc
gccgttgcagtgggtgcctgctccttcctagagggtctgtgctggacgagaacggcggaa
cggcaggcgtcaaggatgaggaggctgtacctggaggccgtcctgagccaggaggtggcg
ttcttcgacgccgcgccctcctcgccgtcgtcgccgcaggcccaggcccaggccaccacg
ttccgcgtcatctccaccgtctccgacgacgccgacgccatccagaacttcctcggcgag
aagctccccatggtcctggccaacgcgacgctcttcttcggcgcgctggccgtgtcgttc
gtgttcgcgtggcggctcgcgctggcgggcctcccgttcacgctcctcctcttcgtcacg
ccgagcgtgctcctcgccgggcgcatggccgcggcggccggggaggcccgcgcggcgtac
gaggaggcgggcgggatagcgcagcaggcggtgtcgtccatccggacggtggcgtcgtac
accgcggagcggcggacggtggagcggttccgcggcgcggtggcgcggagcgcggcgctc
ggcgtcaggcaggggctcatcaagggcgccgtgatcgggagcatgggcgtcatctacgcc
gtctggtccttcttgtcgtggatcggcagcctcctcgtcatccacctgcacgcccagggc
ggccacgtgttcgtcgcctccatctgcatcgttttggcgggaatgtcgatcatgatggcg
ctgccgaacctccggtacttcattgacgcgacggcggcggcgagccggatgcaagaaatg
atcgaaatgctcccaccgctcgaaggggcggagaagaagggagccaccatggaaaggatc
aggggcgagatcgtgttcaaagacgtgcacttctcgtacccgtcgaggccggacacgctg
gtgctcaacggcttcaacctgaccatctctgagggcgccaccgtcggtctcgtcggcggc
agcgggtccgggaagtccaccgtgatctcgctgctgcagaggttctacagcccggactcc
ggggagatatcgatggacgaccatggcattgacacgctcaatgtggagtggcttaggagc
cagatagggctagtgagccaagagcctgtactgtttgcgacctccattagggagaacata
ctattcggcgacgagacggcctcgttgaagcaagtcgtcgccgcggcgaagatggccaat
gcccacgagttcatcgtcaagttgccccatggatacgaaactcatgttggtcagttcggg
acgcagctgtcgggagggcagaagcagcgcatcgccattgctcgagcgctcgtccgggac
ccgaggatcctgctgctggacgaggcgacgagcgcgctcgacgccgagtcggagcggacg
gtgcaggacgcgctggaccgggcgtccgtgggccggaccaccgtgatcgtagcgcaccgc
ctctcgacgctccgcaaggcggacacgattgcggtgctcgacgctggccgcgtcgtggag
gccggcacgcacgacgagctcttggggatggacgacgggggtgaaggcggcgtgtacgcc
aggatggtgcacctgcagaaggcgccacccgtggcggcgagggaggagcgccaccgcgcc
gtggatgtggtggagagcgagatggtgtcgttccgcagcgtggagattatgtcggcggtc
agcgccaccgagcaccgtcctagccccgcgccgtcgttctgctcggtcgaacactcgacg
gagattgggaggaagctcgtggaccacggtgtggcgcgctccaggaagccctcgaagctt
cgcctgctgaagatgaaccggccggagtggaagcaggcgttgcttgggtgcgttggcgcc
gtcgtcttcggcgcggtgctgccgctgtactcgtacagcctaggctcgttgccggaggtt
tatttcctcgccgacgatggccagatccgttccaagaccaggttgtactccttcctcttc
cttggcatcgccgtcgtctgcatcacggcgaacatcgtgcagcactacaacttcgcggtg
atgggcgagcgcctgacggagcgtgtccggggccagatgctcgccaagatcctctccttc
gaggtcgggtggttcgacgaggacgagaactcgagcgccgcggtgtgcgcgcggctggcg
acgcagtcgagcaaggtccgctccctcgtcggcgaccgcatgtgcctgctggtccaggcg
ggcgccacggcgtcgctgggcttctcgctcgcgctcgccgtgtcgtggcgcctcgccacg
gtgatgatggccatgcagccgctgatcatcgcgagcttctacttcaagaaggtgctcatg
gctgccatgtccaagaaggccaagaaggcgcaggtgcaggggagccagctcgccagcgag
gccgtggtgaaccaccggacgatcaccgcgttctcgtcgcagcggcggatgctccgcctg
tacgaggccgcgcaacaaggccccaagaaggacaacgtggcgcactcgtggttctccggc
ttctgcctgtgcctgtgccagttcagcaacaccggcagcatggcggtcgctctctggtac
ggaggcaagctcatggccaaggggctcatcactcccacgcacctgttccaggtgttcttc
atgctcatgaccatgggaagggtcatcgccgacgccgggagcttgacgtcggacttggcg
caaggcggcgacgcggtgcgctccgtcctcgacacgctggaccgtgaaccgacgatcaag
gacgacgacaacgacaacgagaggaagaagaagaaacggaaggagataaaaggcgcgatc
gagttcaagaacgtgcacttcagctacccgacgcggccggaggtggccgtgctcgccgga
ttcagcctcgagatcggcgcggggaagacggtggcgctcgtcgggccgagcgggtccggc
aagtcgacggtgatcgggctgatcgagcggttctacgacgcgcagaggggctcggtcctg
gtcgacggcgaggacatcaggagctacagccttgcacgcctccggtcgcaggtggcgctc
gtcagccaggagccgacgctcttctccgggacgatacgcgacaacatagcgtacggcgcc
gccgaagagcacgccaccgaggacgaggtggcccgcgccgcggcgctcgccaacgcccac
gggttcatcagcgccatggagcgcgggtacgacacgcgcgtcggggagcgcggcgcgcag
ctgtcgggggggcagaggcagcggatcgcgctggcgcgggcggtgctgaaggacgcgagg
atcctgctgctggacgaggcgacaagcgcgctggacgccgcgtcggagaggctggtgcag
gacaccgtggaccggatgctgcgggggaggacgtgcgtcgtggtggcgcaccgcctctcg
acggtggagaagtccgacacgatcgcggtggtgaaggacgggagggtggcggagagaggg
aggcaccacgagctcctcgccgtcggccgcgccgggacgtactacaacctgatcaagctc
cagcacggcagatcgccgtgccttagtcccatgtga
DBGET
integrated database retrieval system
