Oryza glaberrima (African rice): 127770028
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Entry
127770028 CDS
T08853
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127770028
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127770028
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogl04040
]
127770028
Protein phosphatases and associated proteins [BR:
ogl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127770028
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
127770028
Ion channels [BR:
ogl04040
]
Chloride channels
Chloride channel (CLC)
127770028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
HCO3_cotransp
Motif
Other DBs
NCBI-GeneID:
127770028
NCBI-ProteinID:
XP_052151658
UniProt:
I1NTV9
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Position
1:34816430..34821160
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AA seq
793 aa
AA seq
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MAVGTESGSGGVAESAPSTPMSAMTTTPISARSVRWESDMPDIEEGGGGLERPLLRRRGT
NTTSQMAIVGANVCPIESLDYELVENEVYKQDWRSRGKLQIFHYQILKWVLALLVGLIVG
LIGFFNNIAVENIAGFKLLLTTNLMLQNRYKAAFLWFISCNAMLAAAAAALCAYFGPAAA
GSGIPEVKAYLNGVDAPSILAPSTLFVKIVGSIFGVSAGFVLGKEGPMVHTGACVASFLG
QGGSRKYGFTWNWLRYFKNDLDRRDLITCGAAAGVTAAFRAPVGGVLFALEEATSWWRSA
LLWRTFSTTAVAAMVLRSLIEYCRSGNCGLFGKGGLIMFDVSSQVTSYTTMDLAAVVLLA
IVGGLLGALFNFLLNRILRVYSYINEKGAPYKIILTVVISLVTSCCSFGLPWLTACTPCP
PELAASGHCPTIGRSGNFKNFRCPPGQYNAMASLFLNTNDDAIRNLFSGGTESEFGVPML
LAFFTAVYSLGLVTYGVAVPSGLFIPVILSGASFGRLLGKLLGALTGLDTGLFALLGAAS
FLGGTMRMTVSVCVILLELTNDLLLLPLIMLVLLVSKTVADCFNKGVYEQMVRMKGLPYL
EAHAEPCMRSLVAGDVVSAPLIAFSSVESVGTVVDTLRRTGHNGFPVIEDAPFAPEPELC
GLVLRSHLLVLLRAKTFTADRVKTGAAEVFRKLAPFDFAKPGSGKGLTVDDLDLTEEEMA
MYVDLHPIANRSPYTVVENMSLAKAAVLFRQLGLRHMCVVPRTPGRPPVVGILTRHDFMP
GYIRGLFPNVLRE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaggaacagagagtggctcgggcggcgtagctgagagcgccccctcgacgcca
atgtcggcaatgacaacaacgcccatatcggcgaggtcggtgaggtgggagagcgacatg
ccggacatcgaggagggaggcggcgggctggagcggccgctgctgcgccgccgcggcacc
aacaccacgtcgcagatggccatcgtcggcgccaacgtctgccccatcgagagcctcgat
tacgaacttgtggagaatgaagtgtacaagcaggactggagatcaagggggaaattgcaa
atcttccactatcagatccttaaatgggtcctagcacttcttgttggattaatagttggc
ctaataggattcttcaacaacattgccgtcgaaaacatagccgggttcaagctgctcctg
acgaccaatctaatgctccagaacaggtacaaggcggcctttctatggtttatcagctgc
aatgcaatgttggcagcagccgctgcagcattgtgcgcttactttggcccagcggctgcc
ggatctggcatacctgaggtgaaggcctatctgaatggtgtcgacgcgccgtccatctta
gcgcccagtaccctcttcgtcaagattgttgggtctatatttggggtgtctgctgggttt
gtgctgggcaaggaaggtcctatggtgcacactggggcttgtgttgcctcctttctagga
caaggcgggtcgcgcaagtatggcttcacttggaattggctcaggtacttcaagaatgat
ttggaccgcagggatctgatcacctgtggagctgcagcaggagttacagcagccttccgc
gcccctgtcggcggtgtcctcttcgcacttgaagaagcaacatcctggtggcggagcgcg
cttctctggaggacattctccacgacagcagtggcggcaatggtgctaaggtccctaata
gagtactgccgcagcggcaactgtggcctgttcgggaaaggagggctgatcatgttcgac
gtaagttcacaggtgacatcatacaccaccatggatctcgccgcggttgtgctgctcgcc
atcgtcggcgggctacttggagcactcttcaacttcctcctcaatcggatccttcgtgtg
tatagctacatcaacgagaaaggcgcgccgtacaagatcattcttacggtggtcatctcg
ctggtcacctcgtgctgctccttcggcttgccgtggctgacggcgtgcacgccatgcccg
ccggagctggccgccagcggccactgcccgaccatcggccgctccggcaacttcaagaac
ttccggtgtccgccggggcagtacaacgccatggcgtcgctgttcctcaacaccaacgac
gacgccatccgcaacctcttcagcggcggcacggagagcgagttcggcgtgcccatgctg
ctcgcgttcttcaccgccgtctactcgctcggcctggtcacctacggcgtggccgtgccg
tcgggcctcttcatccccgtgatcctctccggcgcgtcgttcggccggctgctcgggaag
ctgctcggcgcgctcaccggcctcgacacagggctcttcgcgctgctcggcgcggcgtcc
ttcctcggcgggacgatgcggatgacggtgtcggtgtgcgtcatcctcctggagctcacc
aacgacctcctgctgctgccgctcatcatgctggtgctgctcgtctccaagacggtggcc
gactgcttcaacaagggcgtgtacgagcagatggtgcgcatgaaggggctcccttacctg
gaggcgcacgccgagccgtgcatgcgcagcctggtcgccggcgacgtcgtgtccgcgccg
ctcatcgccttctccagcgtcgagagcgtcggcaccgtcgtggacacgctgcgccgcacg
gggcacaacgggttcccggtgatcgaggacgcgccgttcgcgccggagccggagctgtgc
ggcctcgtgctgcgctcccacctcctcgtgctcctccgcgccaagaccttcaccgccgac
cgcgtcaagaccggcgccgccgaggtgttccgcaagctcgcgccgttcgacttcgccaag
cccgggtcgggcaagggcctcactgtcgacgacctggacctcaccgaggaggagatggcc
atgtacgtcgacctccacccgatcgccaaccgctcgccgtacaccgtagtggagaacatg
tcgctggccaaggccgccgtgctcttccgccagctcggcctccgccacatgtgcgtcgtg
ccgaggacgccggggaggccgccggtggtcgggatcctgacgcgacacgacttcatgccg
ggttacatccgcgggttgtttccgaacgtcctccgtgagtag
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