Oryza glaberrima (African rice): 127770034
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Entry
127770034 CDS
T08853
Name
(RefSeq) protein FORGETTER 1-like
KO
K26273
protein strawberry notch
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127770034
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127770034
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
ResIII
PHD
HVO_2753_ZBP
DUF5817
DUF7560
zf-PHD-like
PHD_4
Motif
Other DBs
NCBI-GeneID:
127770034
NCBI-ProteinID:
XP_052151662
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All DBs
Position
4:complement(27189715..27209336)
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AA seq
1319 aa
AA seq
DB search
MAGGSSPSPAAAPIQVRCAGCRGVLAVAPGMTEFICPKCGMAQRLPPQLMPKPPPSSSSS
AAATPAPPAPAAPPPPTSRRGGGGGAALPPPQAQGVDPTKIQLPCANCQAVLNVPHGLAR
FRCPQCGVELAVDLAKLHNFLASSNNNAAAAPPDNVPPASGPASRAPLVPAPPPAPFPPV
PTPGMTQAAQMVPGALIPMVLPITDPPEEINEVAIDVEREEDEGGTVGETFTDYRPPKLS
LGLPHPDPIVETSSLSAVQPPEPTYSLNIMDELDETKALSCLQIETLVYACQRHLYHLPT
GDRAGFFIGDGAGVGKGRTIAGLIWENWQQGRHKAVWVSIGSDLKYDARRDLDDVGAKCV
QVHPLNKLPYSKLDSKAIGIKNGVIFVTYSSLIASSERGRSRLQQLVQWCGQEFDGLLVF
DECHKAKNLIPDAGSQPTRTGKAVLEIQEKLPEARVVYCSATGASEPRNLGYMVRLGLWG
DGTSFQNFAQFLGSLEKGGVGALELVAMDMKARGMYVCRTLSYKGVDFDIVEAPLEERMM
NMYRKAAEFWAEFRLELLSAGESFTEGISNQIWRLYWASHQRFFRHMCMSAKVPAVVKLA
KEALAENKCVVVGLQSTGEARTEEAITKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDS
FQQGEEKVTEIHRKRHSAPDVSFKGRVRKVAKLVEVSDDDSDDYSPSESDHGSTESDEEF
HMCQICNTEEEKTLLLHCSGCSRHVHPGCLTPPWTGVLTDDWSCYTCKKLEGEENEQDAH
VADFSQRYDAAVEKKKKILDMIRSLDLPNNPLDDIIDQLGGPDNVAEITGRRGMLIRASD
GKGVVYQARNAKEVSMEMINMHEKQQFMDGKKLISIISEAGSAGVSLHADRRAKNQRRRV
HITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQ
GDRRAGPSLSAFNYDSNYGKKALTIMYRGIMEQDSFPVVPPGCSDNQSSIQEFIAEAKAA
LVSVGIIRDAVVCNGKVAGKLSGRIVDSDMHDVARFLNRLLGLAPKIQNRLFDLFTSILD
VVLHNARIEGQLDSGIVDIKAKNVEMKESPKTVHIDSLSGASTVLFTFTIDRGVTWETAK
SMLDERQKDGAGSSNDGFYESKREWMGGRHFILAFEGSIEGMYKIIRPAIGEALREMPLT
ELKSKYRKVSSIEKVNKGWQDEYDASSKQCMHGSKCKVGSYCTVGRRLQEVNILGGLILP
VWGTIEKALAKQVRQSHKRVRVVRLETTTDNQRIVGLLIPNSAVESVLTGLQWVQDIDD
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggctcctccccctccccggccgccgcgcccatccaggtgcgctgcgccgga
tgccgcggcgtcctcgccgtcgccccaggcatgaccgagttcatctgccccaagtgcggc
atggcgcagcgcctccccccgcagctgatgcccaagccgccgccctcctcctcctcctcc
gccgccgcgacccccgcgcctcccgccccggcggcaccgccgccgcccacgtcccggaga
ggaggcggaggcggcgcggcccttccgcccccgcaggcgcagggggtggaccccacgaag
atccagctcccctgcgccaactgccaggccgtgctcaacgtgccccacggcctcgcccgc
ttccgctgcccgcagtgcggcgtggagctcgccgtcgacctcgccaagctgcacaacttc
ctggcctcctccaacaacaacgccgccgcggcgccgccggacaacgtcccgccggcctcg
ggacccgcgtcgcgggcgcctttggtgcctgcgcctccgcccgccccgttcccccccgtg
ccgacgccaggcatgacgcaggcggcgcagatggtgcctggcgcgttgatcccgatggtg
cttcccatcactgatccgcctgaggagatcaacgaggttgcaattgatgttgagcgtgaa
gaagatgaaggtggtactgttggagaaacgttcactgactataggcctcccaaactctct
cttggtctgcctcatccagatccaatagtagaaacttcttctttgtcagctgtacagcct
cctgagccaacttacagcttgaacatcatggatgaattggatgagacaaaggccttgtct
tgcttgcaaatcgaaacattagtttatgcttgtcagcggcacctttatcatctccctact
ggtgatagagcaggttttttcattggtgatggagctggtgttggtaagggccggacaatt
gctggattaatatgggaaaattggcaacagggaaggcataaggcagtgtgggtatctatt
ggctctgatttgaagtatgatgctcgaagagatttggatgacgttggtgcaaaatgtgta
caggtgcaccctttaaataagctaccatattctaagctagactcaaaggccattggtatc
aagaatggggtaatttttgtaacgtacagcagcttgatagcatcatctgagagaggtcgt
tcccgtttgcagcaattggttcagtggtgtggacaagaatttgatggtcttctagtgttt
gatgagtgccacaaggccaaaaatctcattcctgatgcagggagccagcccactcgcact
ggtaaagctgttcttgaaatccaggaaaagctacctgaggcacgggttgtttattgctcg
gcaactggtgcatcagaaccacggaatttgggctatatggttcggcttggactttggggc
gatggaacatcatttcagaattttgcgcaatttttaggatctctcgagaaaggtggtgtg
ggcgctcttgaacttgttgccatggacatgaaagccaggggtatgtatgtttgccgcaca
ctaagttataagggggttgattttgatattgtggaggctccccttgaggaaagaatgatg
aatatgtacagaaaggcagccgaattttgggctgagttccgccttgagctcctatcagca
ggtgaatcatttacagaaggcatttcaaatcaaatatggcggctatattgggctagccat
cagcgtttcttcaggcatatgtgcatgtctgcaaaagtacctgctgttgtgaagttggct
aaggaggccctggcagagaataagtgtgtggtggttggtcttcagagcactggagaggct
cgaacagaagaagctatcacaaaatatggtgttgaaatggaagactttgtttctggtcct
cgggagctgcttctaaagctggtagaagaaaattaccctctacctccgaagcctgattct
tttcaacaaggtgaagaaaaagtcacagaaattcaccgtaagcggcattctgccccagat
gtatcatttaaaggacgtgttagaaaagtagcaaaactggtagaagtgagtgatgatgac
agtgatgattactctccatctgagtcagatcatggatcgacagagtctgatgaggagttt
cacatgtgtcaaatctgtaacacagaggaggagaagactctgttgcttcattgttctggt
tgttctcgacatgttcaccctggttgtctgacaccaccttggactggggtattaactgat
gactggtcatgctacacatgcaagaagttagaaggagaggaaaatgaacaagatgctcat
gtagctgatttttcacagaggtatgatgctgcagtagagaaaaaaaagaagattttggat
atgatacgttctttggatctccctaacaatcctcttgatgacatcattgatcagctagga
ggccctgacaatgttgcagaaataactggacggcgtggtatgctaataagagcttctgac
ggaaaaggcgttgtttatcaggcgcggaatgcgaaagaagtgtcgatggagatgatcaat
atgcatgaaaaacagcagttcatggatggcaaaaaactaatatctattatatctgaagca
ggatcagctggcgtttcgctgcatgctgatagaagggcaaaaaaccagagaagaagagta
cacataacacttgagctcccttggagtgcagatcgtgcaatacaacagtttgggagaact
catcgttctaatcaaacttctgcaccacaatataggcttctctttacaaatcttggtggt
gaaaagcgatttgcatcaatcgtagcaaaaagactggagtctctaggagctttaacgcaa
ggagatcgcagggctggaccttctctgagtgcttttaactacgacagcaattatgggaaa
aaagccctaaccatcatgtatagaggaataatggagcaggattcttttccagttgttcct
ccggggtgttctgacaatcaatctagcatccaagagttcattgctgaagcaaaagctgct
ctagtatcagttgggattatcagggatgctgtagtgtgcaatggaaaagttgctgggaag
ctttctggtcggattgttgactcagatatgcatgatgttgctcgttttcttaaccgcctt
ttgggactggctccgaaaatccagaataggttatttgatctttttacaagtatacttgat
gttgttttgcacaatgcacgaatagaagggcagctggattctggaatcgttgatataaaa
gctaaaaatgttgaaatgaaagaatcacccaagaccgttcacattgatagcttgtcaggc
gcgtcaactgtactttttactttcaccattgaccgaggagttacttgggagacggcaaaa
tcaatgcttgatgagaggcaaaaggatggtgctggttcttctaatgatgggttttacgag
tccaaaagggaatggatgggaggaaggcatttcatacttgcttttgaaggctcaatcgaa
gggatgtataaaataattcgacctgctattggtgaagcattaagagaaatgcctttaaca
gaactgaaaagcaagtacaggaaggtgtcatcaatagaaaaggttaacaaaggttggcaa
gatgaatatgatgcttcgtccaagcagtgtatgcatggatcgaaatgcaaagtgggaagc
tactgtacagtgggaagaaggttgcaagaggttaacatcttgggtggtctcatacttcca
gtttggggtacaatagaaaaggccctagctaagcaggttcgtcaaagtcacaagcgagta
cgtgttgtccgtttagagacaacaactgacaatcagcgaatcgttggactactcattccg
aattcagctgtggagtcagtattaacaggcttacagtgggtccaagatattgatgactga
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