KEGG   Oryza glaberrima (African rice): 127770050
Entry
127770050         CDS       T08853                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127770050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127770050
Enzymes [BR:ogl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127770050
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127770050
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 127770050
NCBI-ProteinID: XP_052151674
LinkDB
Position
4:28845918..28855013
AA seq 1252 aa
MEEPSKDNGQSSCVVDPELEPMMLDDAREGVSHTLDDANGHSSMDVDRGCHSMDTTRSSL
GDDGKGKRDSYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELF
DSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARL
QNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLC
WLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIY
IKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINT
ITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKAL
FLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDL
NSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDL
RKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLID
RFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIK
WDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDI
RSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIP
FANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSE
YTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEV
ENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGE
DHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLES
QENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVI
TDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLT
RQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMR
PVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC
NT seq 3759 nt   +upstreamnt  +downstreamnt
atggaagagccatcaaaggacaatgggcaatcatcctgtgttgttgatcctgagctggaa
cctatgatgctggatgatgctagagagggagtatcccatacattggatgatgcaaatggg
cattcttctatggatgttgacagaggatgccattctatggacaccacgagatcatctctg
ggtgatgatggtaaaggaaagcgcgactcatatgcccaaattccagtcgacatgagtatt
ccaagcctagaaaagttctgcaaagaagcatcaaggtccttctttgatgagattggtctg
atcagccatcagataaattcttataacgagtttgtctcacatgggctccaggaacttttt
gattctctgggggaagtgactgtggagcctagttatgatccttcaaatagaggaccaggt
ggctggagacatgctatcatcaagtttggaagagtgcaactagaagaaccagtattttgg
tctcatggatgtgatattgatgaacaatcgctcaaactgaagccaaggcatgctcgccta
cagaatatgacatattcttccaaaatgaaagtggaagttcatttccaggtttactctatg
gagaagagtgacaaggctaaaacagggaatgataaatttggttacaagcgaaacattatt
aatgaaacatattatataaatattggccgccttccagttatggttatgtcaaatttatgt
tggctccacaaactcaaggaaagtgattgccaatttgattctggtggatactttttgatc
aagggaatggagaaggtattcattgcgcaagagcaaaaatgtctgaccaggatttgggtt
gaggaccgtccttgctggatggtctctttcttgtctccaatcagaagaaggcgcatatat
ataaaactaattgattctgcaaataatgaagatgccagtggggggaagatcatttccatc
tcctttttgtatgcaaatatgccaatatggttgatgttttttgcactaggcatatcatca
gataaggatatctttgatgttataaatatggaagactgtgatgcttgtgttatcaacaca
attaccgcaactattaaagaatcagatgaattgtgtgaaggcttccgtaaatcagataaa
gcccggcagtatgttgacgaattgattaagaattcaaaatttcctcctgcagagccattt
gatgattatattgctaaatacctcttccccagcataagtgggaaccggaacaaagcactt
ttcttaggttacatggtcaaatgccttttaatggctttcactgggaagcgcaaatgtgac
aacaaggatgatttccggaacaagaggttggacctagctggtgaattgcttggaagagaa
ctccgtgcgcatattaggcatgcagagagactcatggttaaggccttgcagagagattta
aatagtgagcgtgagttacaagaatttgatcattatctggatgcttcaattattaccaat
ggtctaaaccgtgccttctctactggttcttggtgccatccttacaaaagaaatgaaaga
tgtgcaggaattgttgcgacactaaggagaacaaatccgcttcagatgatctcggacttg
aggaaaactcgccaacgagttgcttatgctgggaaagccggtgatgcaagatatccaaat
ccatcctactggggaaaattgtgttttatgtccactcctgatggtgaaaactgtggactt
gtgaaaaatctagctgttacagctactgttagctccagagtagcaccgccattgattgac
aggttcatttcttgtggaatgaataagctgcatgagattcctacagaggaggttcctaga
atggacaaaatcttcctgaatggggattgggtggggtcctgtagtgacccggcttcattt
gtcttgcgtttaaggtgcatgagacgcagtggtctgatagatccacaggttgagataaaa
tgggacaagcaccaaagggaagttcgggtgttttctgatgcaggtcgaatcctcagaccg
cttcttgtggttgaaaatctcaataaaattaggagaccgaagggcagttcatattctttt
cagtggttaatgcaacaagaaataattgagtttattggcgttgaagaagaggaagatata
cgaagtgcctggggcatcaggaacctatttgagagtgaagaagaggctcccatggtaaaa
atgaataaagcagaggatgtcttcaatgttaagaggaagatcggaggggaggtttcaggt
tatacgcactgtgagctggatctttcttttctgctaggattaagttgtggtattatccct
tttgcgaaccacaattttgctcggagggttctttaccaatctgaaaaacattcacagcaa
gctattggatactctacaacaaatccgcacatcagagttgataccctttcccatcaactt
tactatcctcagagaccccttttcaaaacagtgatagctgactgcattggtagatcagaa
tatacttttgggagaaaggatgactttgccagaccagagtatttcaatggccaaaatgca
atagtggcagtgaatgttcatcaggggtttaatcaagaagattccctggttatgaatagg
gcttctcttgagcggggtatgtttaggactgagcacttcaggaactataaggctgaagta
gagaacaaaggtgggccaggtggcaacaaacgactaaaaatgaaggataagattgacttc
ggtaaaatgcaaagcaagagaggacgtgttgacaatcttgacgatgatggattaccatat
gtcggtgcaagtcttcagagtggtgacattgtcattggaaaggtctcagaatctggtgaa
gatcatagtattaagctgaagcatactgaaaagggtatggtgcagagggtattactttca
gctaatgatgaggggaagaactttgcagttgttactctaagacaggttcgatcaccttgc
cttggagataaattttccagcatgcatggccagaaaggtgtcgttggttttctagaatct
caggagaatttcccatttacttaccaaggaatagtaccagatattgtgataaatccacat
gcatttcctacccgtcaaactccaggccagcttcttgaagctgctttggggaaaggaatt
gccctcggtggtacaatgagatatgctacaccattcacaacagcatcgtttgatgtgatc
acagaccaattacacaaggctggattttcgagatggggagctgaaagtgttctcaatggc
cggactggtgaaaggatgcactcattgattttcatgggtcctactttttaccagaggctg
atacacatggcagaagataaggtcaagttcaggaacacggggccagtgcaccccctaaca
cggcaacctgttgctgacaggaagaggtttgggggagtgaagtttggagaaatggagcgt
gactgcctcctcgcccatggtgcagcagccaacctccatgagcggctcttcatgcttagt
gacttctcgcagatgcacgtctgccagacgtgcgaacgtgtggcgaatgttatcatgagg
cctgtcccaggaggaaagaagatccgggggccatactgtgggttctgccgctcttctgaa
aacatagtaaggatcaatgtgccctacggcgcaaagctgctctatcaagagctattcagc
atggggatctgccttagatttgagacggaagtctgctag

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