Oryza glaberrima (African rice): 127770377
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Entry
127770377 CDS
T08853
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127770377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127770377
Spliceosome [BR:
ogl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127770377
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
127770377
NCBI-ProteinID:
XP_052152027
UniProt:
I1PNQ5
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Position
4:24456702..24460575
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AA seq
484 aa
AA seq
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MASLADSFLADLDELSDNEAYPEEENAEAVGTEEIGDDDMPDLESLNYDDLDSVSKLQKT
QRYNDIMQKVENALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVQKIGNEMDLTLVDLEGLLPSAIIMVISVTASTTSGKPL
SEENLVKTIEACERALTLDAAKKKVLEFVESRMGYIAPNLSTIVGSAVASKLMGTAGGLG
ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTDVFQSTPPALRTRACRLIAAKS
TLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDFEPKKKRGGRRL
RKMKERYAQTDMMKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSTAPSKLSAK
ITKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHGNLLGSGTQSTYFSETGTFSK
IKRT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgctgattctttcttagcggatcttgatgaactttcagacaatgaagcc
tatcctgaggaagaaaatgctgaggcagtgggcacggaagagattggtgatgatgatatg
cctgacctcgagtctcttaattatgatgaccttgatagtgtttcaaagcttcagaaaaca
caacgttacaatgacattatgcaaaaagttgaaaatgcacttcagaaaggtacagatttt
tccaatcaagggtcgatcctggaggaagatccagaataccagctgattgttgattgcaat
gctctatcagtagatattgagaatgagatcattataatccataatttcatacgtgacaag
tataggctgaagtttcctgaactagaatcccttgttcatcatccgatcgattatgctcgt
gttgtccagaagattggaaatgagatggatttaacgcttgtagatctggaagggctttta
ccttctgcaattataatggtaatttcagtgacagcatcaacgacaagtgggaagccgctt
tccgaggagaacttggtaaaaactattgaagcatgtgagagagcccttactcttgatgct
gcaaagaagaaggtacttgaatttgtagagagcagaatgggttacattgcaccaaacctg
tctaccattgttggcagcgctgttgcctcgaagttgatgggaactgctggtggtttggga
gcacttgcaaaaatgcctgcttgtaacgttcagttacttggtgctaagaggaaaaatctt
gctgggttttctactgccacatctcagtttcgtgttggctatcttgaacaaaccgatgta
ttccagagtaccccaccagctctgaggactcgtgcttgcagacttatagctgcaaagtca
actctagcagcaaggattgattcgatcagaggtgatccaacaggaaaagctgggcgtaac
ttgttagaagaaatccgtaagaagattgagaagtggcaagaaccgcctcctgcaaagctt
ccaaaaccacttcctgttccagactttgagcctaaaaagaagagagggggtcggcggctt
cgaaaaatgaaagaaagatatgcacaaactgatatgatgaagcttgctaaccgaatgcag
tttggtgtaccagaagagagctcattgggtgatggtttaggggaaggttatggcatgctt
ggacaggcaggaagtggaaagctacgcgtgtcaactgcaccaagcaaactttctgcaaaa
attaccaagaaattcaaggagaagagctatggtagcagtggtgcaacatcggggctgact
tctagtttggcgtttacaccagttcaggggatagagttgtcaaatccacaggcccacggc
aacctgcttggaagtggaactcagagcacctatttttcagagaccgggacgttctcgaag
atcaaaaggacctga
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