Oryza glaberrima (African rice): 127770431
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Entry
127770431 CDS
T08853
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00900
Terpenoid backbone biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Module
ogl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
127770431
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ogl01006
]
127770431
Enzymes [BR:
ogl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
127770431
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
127770431
Prenyltransferases [BR:
ogl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
127770431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
127770431
NCBI-ProteinID:
XP_052152112
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Position
4:complement(29649915..29652759)
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AA seq
432 aa
AA seq
DB search
MSMQEMLRIGDDDGRSDALERELKEKLRLRGDASPAKCTRQEQRWRSDHGIVDARERFVQ
AYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLLKQGSEVTED
DFFLACVLGWCVEWFQACALLLDDIMDDSHTRRDQICWYRRPEVGLRGINDGIILKCHIL
IMIKKYFREKPYFLDLLEIWSEIALQTSLGQMLDLIGTHTGADDLAKYSIEGYRRIVKYK
TAYYSFYLPAVELYKFFKFTISYESDNRGVSLQQTLEKRCRKNMLRKNEVANALLLSGAK
LEDFSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTDIEDHKCSWLIVQALGHADNN
QIEVLHRNYGKKDSSSVSEVKRTYAALDLKDIFSEFERRCYNHLVTSIEAQKDHAAREIL
KSFLKKIHQRKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcaggagatgctccgcattggagacgacgacggccggagcgatgctctggaa
cgcgagctcaaggagaagctgaggttgcgcggcgatgcctcaccggcgaaatgcaccagg
caggagcagcggtggcggtctgatcatggcatcgtcgacgcccgcgagaggttcgtgcag
gcgtacggccgcctcagggacgatctcgtcggcgacgactcgtgcgagctcaccgacgaa
gccaggcgctggcttgctcagatgatcgactacaatgtacctggaggaaagttgaaccga
gggctgtcagtgatagacagttacctgctgttgaaacaaggaagtgaggttactgaagat
gacttcttccttgcttgtgtgcttggttggtgtgtagaatggtttcaagcatgtgcacta
ctacttgatgacatcatggacgattcacataccaggagagatcagatttgctggtaccgg
cgacctgaggttggcctcaggggtataaacgatggtatcatactaaaatgtcacatcttg
ataatgataaaaaagtatttcagagaaaagccttactttcttgatctcttagaaatatgg
agcgagatagctctgcagacttctctggggcagatgcttgatcttattggcacacatact
ggagcagatgatcttgcaaaatacagtattgaaggctaccgtcgcattgttaagtacaag
acagcgtactactccttttaccttcctgctgtagaactgtacaagttcttcaagttcacg
atatcatatgaatcagataatagaggggtttctttgcagcaaactcttgaaaaaaggtgc
aggaaaaacatgttgaggaagaatgaagtggccaatgctttgctcttatctggcgcaaaa
cttgaagacttcagtggtctaaaggatatacttattgaaatgggcatatattttcagata
caggatgactacttggactgttttgctgaccctaacaccataggcaagattggaactgac
atcgaagatcataagtgttcctggttaatagtacaggctcttggtcatgctgacaacaat
caaatagaagtactacataggaactatggcaagaaggattcaagttctgtttccgaagta
aagaggacttacgcggcgcttgatttgaaagatatcttctctgagttcgaacgtcgatgc
tacaaccacctggtcacctctatcgaagctcagaaggatcatgcagcacgggagatcctg
aaatcatttctgaagaaaattcatcaaaggaagaagtag
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