Oryza glaberrima (African rice): 127770432
Help
Entry
127770432 CDS
T08853
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00900
Terpenoid backbone biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Module
ogl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
127770432
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ogl01006
]
127770432
Enzymes [BR:
ogl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
127770432
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
127770432
Prenyltransferases [BR:
ogl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
127770432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Annexin
Motif
Other DBs
NCBI-GeneID:
127770432
NCBI-ProteinID:
XP_052152115
UniProt:
I1PQG1
LinkDB
All DBs
Position
4:complement(29657459..29661345)
Genome browser
AA seq
407 aa
AA seq
DB search
MGALAASIASHLPSGVSAAVAALAASPGEVVRRAAGLEDELRELLRLNGGGRGRGGAAAE
QGQGEQTRDRFVRAYERLKSELLNDRAFNFDFTEETRQWVAKMMDYNVPGGKLNRGLSVV
DSYMLLRQGTEVDDEDFYLACVLGWCVEWLQASALVLDDITDNAYTRRDNLCWYKLPTVG
MSAINDGVLLKCHVQAIIKRYFKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDL
ARYRIQGYRRIVKYKTSYYSFYLPVACALLLNGARLSDYVELKNVLIEMGVYFQIQDDYL
DCFGDPEVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSDPKCVAEVKSVYR
ELDLQDIFLEYESRVYKHLVSTIDAETDRAIRDILKSFLKKIYRRKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctggcggcgtcgatcgcgtcgcacctgccgtcgggggtgtcggcggcggtg
gcggcgctggcggcgagcccgggggaggtggtgaggagggcggcggggctggaggacgag
ctccgggagcttctccggctgaacggcggcgggcgcgggcggggcggcgcggcggcggag
caggggcagggcgagcagacgagggacaggttcgtgcgcgcgtacgagcggctcaagagt
gagctgctcaacgaccgagccttcaacttcgacttcactgaggagaccaggcagtgggtc
gccaagatgatggactacaacgtgccaggagggaaactgaaccgtgggctctcggtggtg
gacagctacatgctgctgagacaaggaaccgaggttgacgacgaggatttctacctcgcc
tgcgtgctcggttggtgcgtcgaatggctgcaagcgtcagcccttgtgctcgatgacatc
acggacaacgcctacacgaggcgagataacctctgctggtacaagctaccaacggttggc
atgtctgctataaacgatggtgtgctgctcaagtgccatgtccaggcaatcatcaagaga
tacttcaaggagaagttctacttcctggacctcatggagctatggaacgagataggcttg
cagactgccatggggcagatgctggatctcatcaccactcataccggcgccaaggatctc
gccagatacagaattcaggggtaccgtcgcattgtcaagtacaagacatcatactattcg
ttctacctgccggttgcatgtgcattactcttgaatggcgcgagattgagtgactatgtt
gagctgaaaaatgtacttatcgaaatgggcgtatactttcagatacaggatgactacttg
gattgctttggtgacccagaagtgattggcaaggttggaacagacattgaagactacaag
tgttcctggctaatagtacaggctatggaactcgccaatgagaatgagatgaaaatacta
tatgagaactacgggaagtctgacccaaaatgcgtagcagaagtgaagagcgtttacagg
gagcttgatcttcaggacatatttttggagtacgagtcaagagtttacaagcacctggtt
tcgaccatcgacgccgagactgaccgtgcaattcgggatattttgaagtcgtttctgaag
aagatttacaggaggaagaagtag
DBGET
integrated database retrieval system