Oryza glaberrima (African rice): 127770440
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Entry
127770440 CDS
T08853
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K27740
protein auxin signaling F-box 2/3
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127770440
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_6
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
127770440
NCBI-ProteinID:
XP_052152124
UniProt:
I1P6H1
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Position
4:complement(16662207..16666646)
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AA seq
575 aa
AA seq
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MTYFPEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFVGNCYAVRAGRVAARF
PNVRALTVKGKPHFADFNLVPPDWGGYAAPWIEAAARGCHGLEELRMKRMVVSDESLELL
ARSFPRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQENEVEDRGPRWLSCFPDSCTS
LVSLNFACIKGEVNAGSLERLVSRSPNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNL
TDDFQTESYFKLTSALEKCKMLRSLSGFWDASPVCLSFIYPLCAQLTGLNLSYAPTLDAS
DLTKMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLV
AVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFG
AIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRK
LEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSN
EMEENHGDLPKVEKLYVYRTTAGARDDAPNFVKIL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacttcccggaggaggtggtggagcacatcttcagcttcctgccggcgcagcgc
gaccgcaacacggtctcgctcgtctgcaaggtgtggtacgagatcgagaggctgagccgc
cgcggcgtcttcgtgggcaactgctacgccgtgcgcgccggccgcgtcgccgcgcggttc
cccaacgtgcgggcgctcacggtgaaggggaagccccacttcgctgacttcaacctcgtg
ccccccgactggggcggctacgcggcgccgtggatcgaggcggccgcgaggggatgccac
ggcctggaggagctcaggatgaagcggatggtggtgtccgacgagagcctcgagctgctg
gctcgctcgttcccgcggttcagggctcttgttcttatcagctgcgaggggttcagcact
gacgggctagccgccgtcgcgagccattgcaagcttctgagggagttggatttgcaggaa
aatgaagtggaggatcgagggcctaggtggctttcctgcttccctgattcctgcacatca
cttgtctcattgaattttgcctgcatcaaaggggaggttaatgctggttcactggagaga
cttgttagcaggtccccaaacctgcggagtttgaggctgaatcgatctgtatcggtagat
acacttgcaaagatactactgcgtacccctaacttggaggatttggggacagggaatttg
acagatgacttccaaactgagtcctactttaagcttaccagtgctctggagaaatgcaag
atgttgaggagtttgtctggattctgggatgcttctcctgtttgcctgtcatttatctac
cccctgtgtgctcaactgacaggattgaacttgagctatgcccccacacttgatgcttct
gaccttacaaaaatgattagccgctgtgtgaagctccaacgcctttgggtactggattgt
atctcggacaaaggcttgcaagtggtggcctccagttgcaaagacttgcaagaactcagg
gtatttccatcagatttctacgttgctggttattctgcagtgacagaggagggacttgtt
gcagtatccttgggctgtccaaaactgaactcactactgtacttctgtcaccaaatgact
aatgctgcactagttactgtcgccaagaactgtccaaatttcacacgtttcagactttgt
attcttgagccagggaagcctgatgttgtgacaagccaaccattagatgaaggctttgga
gctattgttcgtgagtgcaagggattacaacgtttgtcaatatctggtcttctcacagac
aaagttttcatgtatattgggaaatatgcaaaacaacttgagatgctttctatagcattt
gctggtgacagtgataagggtatgatgcatgttatgaatggatgcaagaatttaaggaaa
ctggagataagagatagcccgtttggtgatgctgcactcttggggaattttgctaggtac
gagacaatgcgatccctttggatgtcatcttgcaatgtcacgttaaaggggtgccaagtc
cttgcgtcaaagatgccgatgctcaatgttgaggtcataaatgagcgggatggtagcaat
gaaatggaggaaaaccatggagatctgcctaaagtggagaaattatatgtgtaccgcaca
actgctggggcgagggatgatgcaccaaattttgttaaaatcctatag
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