Oryza glaberrima (African rice): 127770556
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Entry
127770556 CDS
T08853
Name
(RefSeq) AP-3 complex subunit delta
KO
K12396
AP-3 complex subunit delta
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127770556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127770556
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Others
AP-3 complex
127770556
Endosome - Golgi transport
127770556
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
Retro_M
RMI1_C
Motif
Other DBs
NCBI-GeneID:
127770556
NCBI-ProteinID:
XP_052152281
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All DBs
Position
1:16726651..16729637
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AA seq
942 aa
AA seq
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MASAPPAAPAPAPSLVDTLFQRSLDDLVKSLRADPSAAGESAAVARALSEIHREIRAPDA
ATKAVALQKLTYLSSLHFAPVASHPLAFPAIELIASPQLPHRRLAYLAASLSLHPASLSL
LPLATHQLHKDLSPSTSSAANHHVTALALQLLASPAAAAAPDLPVHLAHDLVPHLSRGSP
RAIAAAARVIAASPSAAVPVLFKPLAACLASPDPRASAAAAAAFCELSAPPADAAPFLPL
APDLYNLLTTSRSNWALIKVLKVFARLAPLESRLAARIVDPVCQLLARSAAMSLTFECIR
TVLTALPAHDAAVRLAIGKAKEFLAAEDDPNLRYLGLLALGMLGPAYASTLHECRGVIAQ
SLGDADSNIRREALHLMMGLIDDSNATDIAGMLVSHASKSDPEFANDILGAVLSACGHNV
YELVSDFDWYVSLLTDMGRNLHCAQGDEIGRQLVDVGLRVQDARPELVHSSRTLLIDPAL
LGNHLLCPVLSAAAWVSGEYVNFTKDPVELVEALLQPRTSLLPMSVRAVYIQAVLKVITF
CCNLYVERLSDSSKEVSVALNGLSMDQTVSGGSDAPIGSSNEQITVPRMMEKDPFSLKLV
VHMINLIETTVGPLVECNEVEVLERARNLIGFVYSLREIQELKESKFDDDKHSRVKELVK
NMQTVLSHEIGPVSLNAQEKVSLPDDLVLNENLAELVDIISEDDTTLSSSIVFYPRSCGS
VETRDEPALSLGSSSLLSEHRKRHGLYYLPTGKAEDGPVDYPHANDPLLPASSESALDDK
LKTIQPVTGGKKPKAVKSRPKVVKLDGEDFLSSMVASASVPKEDSLSGAVRGVLLGRDLK
PSSSQKASDKAHEGIINKMDSGESSSQWKNNVDADFVGHPTSSSRPSIQQSHDKESTNPL
ESDGKEARRSRSGHRQGKHKHRERHSTQPDVPQAPIIQDFLL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccccgccggcggcgccggcgccggcgccatcgctggtagacacgctcttc
cagcgctccctcgacgacctcgtcaagtccctccgcgccgacccgtcggccgccggcgag
tccgccgccgtcgcgcgcgcgctctccgagatccaccgggagatccgcgcccccgacgcc
gccaccaaggccgtggcgctccagaagctgacctacctctcgtcgctccacttcgccccc
gtcgcctcccacccgctcgccttcccggccatcgagctcatcgcctcgccgcagctaccc
cacaggcgcctcgcctacctcgccgcctcgctctccctccacccggcctcgctctccctc
ctcccgctcgccacccatcagctccacaaggacctctccccctccacctccagcgccgcc
aaccaccacgtcacggccctcgcgctccagctgctcgcctcccccgccgccgccgccgcg
cccgacctccccgttcacctcgcgcacgacctcgtgccccacctctcccgcgggagcccc
cgggcgatcgcggccgccgcgcgtgtcatagccgcctcgccgtccgcggccgtgccggtc
cttttcaagccactggccgcgtgcctcgcgtcgcctgacccgcgggcgtcggctgctgcc
gcagctgcattctgtgagctgtcggcgccgccagccgatgctgctcctttcctgccgctg
gcgcccgacctctacaatctgctcaccacgtcccgctccaactgggcgctcatcaaggtg
ctcaaggtgtttgcacggctggctcctctggaatcacgcctcgccgcacggattgtcgac
ccggtgtgccagcttctcgcgcgttctgctgctatgtccctgacgtttgagtgcatccgg
actgttctaactgccctgccggcacatgatgctgccgtgcgccttgccattgggaaggcc
aaggagttccttgctgctgaggatgatcccaacctgcggtacctcggcctccttgcgctt
ggtatgcttggaccggcatatgcatcgacgttgcatgaatgccgtggtgtgattgcccaa
tcactgggtgatgctgactcaaacatccgccgggaggcgttgcacctcatgatggggttg
atcgatgacagcaatgccacggacattgctggcatgctggtcagtcatgcttcgaagtca
gacccagagtttgcaaatgacattcttggcgctgttctttcagcatgtgggcacaatgtg
tatgagctggtatcggactttgattggtatgtctcgctcctcacagatatgggtaggaac
cttcattgtgcacagggggatgagattggtcggcagcttgttgatgtgggactgagggtg
caggatgcacggccagagcttgttcattcatctcgaactcttctcattgatcctgctttg
cttggaaaccacctcctttgtcctgttctttctgctgctgcatgggtctcgggtgagtat
gtgaacttcacgaaggatcctgttgagcttgttgaggcacttctgcagccaaggaccagc
ctcctgccgatgtccgtgagagctgtctacatccaggcagtacttaaagtgatcactttc
tgttgcaatttgtatgttgagaggttgagtgattcaagcaaggaagtgtctgtagcattg
aatgggttatctatggatcaaactgttagtgggggaagtgacgctccaattgggtctagc
aatgaacaaattacagtccctaggatgatggaaaaggaccctttttcacttaaattggtt
gttcacatgattaacttgattgaaacaacagttggcccacttgttgagtgcaatgaggtt
gaggtcctggaaagggcaagaaacttgattggttttgtttattcgctaagagagattcaa
gaattgaaggaaagcaagtttgatgatgataagcatagcagggtgaaggagcttgttaag
aatatgcaaacagtattatctcacgaaatagggcctgtttctttaaatgcacaagagaaa
gtatcccttccagatgatcttgtcctgaatgaaaatcttgcagagcttgttgacatcatc
agtgaagatgacactactctgtcatcttcaattgttttctaccctcgtagctgtggttca
gtcgaaaccagagatgaacctgcattatcacttggttcatcttctcttctttctgagcac
cgtaaaaggcacggactgtactatcttccaacaggaaaagcggaggatgggccagttgat
tatcctcatgccaatgatcctctgctgcctgctagcagcgaaagtgctctggatgataaa
ttgaagactatccagcctgttaccggtgggaaaaaaccgaaggccgtcaagtccagacca
aaagtagtgaagttagatggtgaggatttcctaagttctatggtggctagtgcaagtgtt
ccaaaagaagattctttatctggtgctgtacgtggtgtactgttgggtagagatctcaag
ccatcatcttcacaaaaggcttcagataaggctcacgaaggaattataaacaaaatggac
tctggtgaatctagttctcagtggaaaaataatgtagatgctgatttcgtaggccatccc
acttcaagttctagaccaagtattcaacagagccatgataaagagagtacaaaccctctt
gaaagtgatgggaaggaagcgagaagatctaggagtgggcatcgtcaaggaaaacataag
catagagaaaggcatagcactcaacctgatgtacctcaagctcctataatccaggatttt
cttctatag
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