Oryza glaberrima (African rice): 127770820 Help Entry 127770820         CDS       T08853                                  Name (RefSeq) protein RST1   KO K27498   focadhesin Organism ogl  Oryza glaberrima (African rice) Brite KEGG Orthology (KO) [BR:ogl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ogl03019]     127770820 Messenger RNA biogenesis [BR:ogl03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      127770820 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3730 Motif Other DBs NCBI-GeneID:  127770820 NCBI-ProteinID:  XP_052152570 UniProt:  I1NKM0 LinkDB All DBs Position 1:complement(3093797..3108376) Genome browser AA seq 1840 aa AA seqDB search MASSSSAAAAGAGAGAVALGRLVDRTRVPDPTLQRHAVAALFRHLLTSVPPPLPSAAHDA LSSLLASPHPAVAAHAAASVARLAASRADLLSPELALPLLIAPLSASPSPRLASCFVKAV AALVSCALRSGSAASRFLPHDHPFVQALASGADGARAELQRQAARLVAEGVHGVVGFLRP FVMFAAVRKGDTAFVKDLIGALAAAAVAAARPDSAVPVLKLLAECLLHFGRGDGEEVRLW LSSVECLVDAYVVLLRKFAHAQMATYDAQANSVELIEMLLSQCSLHHQFMRNTSVVLGLS KHLFLAQKDLGLCYLPEISVVLSSLAFILSGLEFEHEQLSGLKLLAFLIEWRHENALRTN EAVHHFSEEIVCVLPVINLVISPSKSVKSVASHVLSRFHVLVLDLLASCSSEQQDSSMVH HISKPTSIVPKLVHHLWSQSSSSGFIFTKYITSRGLAESAGNSTEPNYWTHQINEYLSAL RKEKLSLDSLSSKKIQSVAISSLLSSAVSVLVMHPKIGTSAAQSLALLGATDPKLGMPLL VLILFYTKVLYSNNNCDANILLSLLESLPSLAVHGFVLPLSLQLISSMLKKDVKSVLYPI AVRLLCKMWTVTDWAFQNLQGTLDPENFSNSVDDREVFTSIAASVRDVCKQNPDRGVDLI LSVSACIESRDSVVQALGLESLSYLCEEDVVDFYTAWKVISKQLLDFSIDPTVSHGLCIL LRWGAMDSEAYPGTSKHLIQILWSIGTYREKNVDPLWVKARGTAFQSLSHYKISLIKDAI PDFWRINYECFTTERNLEVLKAMDNFQAEIINFEHINRRRLTTDKITTVHKFEKLLDAFP QAVFKGKSAHHRFPGAALLTLNFTPKDILHEGKSKDLPRVHAAYEQALVEMAESMYISRN MVVALLALHSWKSFVSNWMQAVIACLDTKESSKLNKASKAADDIFKILCKCVPVSTPSVV VSIALAIGALCLVVPPTAHLVISSASDFLLRWLFQYEHEHQQWSTALSLGLISNCFHPTD KRSKLQVINGLLEVISKTESYLVKGACGLGLGYCCQALLARADNAADSELEATTQLTERA SVEEILHTLTTSLVQLCPFSCYSLKKLSICGIKSLEGMEEKYVSLEDDPWAVAGLVLGLG NSVVSLYRLGAYEAIIEVKNILISWIPDVDSSSLLFDEEDSASLCMGSCLALPSVLAFCQ KVELLNDDLDALFNRYTSLATNLLSLKKSGTIFQNLLMAICIGAGSFLSSILNDGVHAMK FTDVKDLLDTLKHIYTHPYPPLVHLGGMLGTVNAFGAGAGDLTGICRQPTNSQIKHEKES SLVRGPVLTSSVGETLSTSMIQEIFLLAKDAEDDHIKDYAAWAISFLRSRWLSKNQIIFD DDCSQRNSSDSNQSTSFSDESLVWNLSQWLRDLNFEKPDSMVSTSTVATVLRCLSKAPRL PSIDWGVIVRRCMNVEAHIPDMLTNHRDPKLLREECLYISLAHASHISPLLHFIDDLTDL SRFRRLEINLQSILLQYLSTLMKLFSLSRLDKLSEDLIEYLYSPTSSYLDYSSEQRSMLR TSFWKGICECLVEDVSEESSGFSCIKKCIQSLSPLLSLHKDGQPEFIEEWSAAIKCLTVA QKGLLGDMLQVEISSSFNELEHIDVAKKIIIRARMCSSGCGSVDELGNIKTTILSTRLDG VWWNVLVEVAGALYYADSRMKKQWLLDALDIGCVTAHPSTVLHFVGLLCGSCCIYMPLLI VNPTNVLSDLPVTLPSFLSSSIWDDLRNSVADKLWLLTARIYTWAEQLTHSVGLARHDHI HGSEAEMAIFLANILRCTCIAVEDHLAVEKKLKLANLEAL NT seq 5523 nt NT seq  +upstreamnt  +downstreamnt atggcctcctcctcctccgccgccgcggcgggggcgggggcgggggcggtggcgttgggg cgactcgtcgaccgcacccgcgtccccgaccccaccctgcagcggcacgccgtcgcggcc ctcttccgccacctcctcacctccgtgcccccgccactcccctccgcggcgcacgacgcg ctctcctcgctcctcgcgtcgccgcacccggccgtcgcggcgcacgccgcggcgtccgtc gcccgactcgccgcatcccgcgccgacctcctctccccggagctcgccctcccgctcctc atcgcgcccctctccgcctccccgtccccgcgcctcgcctcctgcttcgtcaaggccgtc gccgcgctcgtctcctgcgcgcttcgctccggctccgccgcgtcgcgcttcctgccccac gatcacccgttcgtccaggcgctcgcctcgggggccgatggcgcgcgcgcggagctgcag cggcaggcggccaggttggtcgccgagggggtacacggggttgtagggtttttgaggcca ttcgttatgtttgctgcggtgaggaagggggacactgcgttcgtgaaggatttgattggc gcactggctgcagcggctgttgcagcggcaagaccggattctgcagtcccggtgctgaaa ttgcttgcggagtgcttgctgcattttggccgtggggatggcgaggaagtgcggctctgg cttagctccgtggagtgcttggtggatgcttatgtggtattattgaggaagtttgctcat gctcaaatggcaacttatgatgcccaagcaaatagtgtggagttgatagaaatgcttcta tcacaatgctcacttcatcaccaatttatgagaaatacttctgttgtacttggattatca aaacatttgtttttggctcaaaaggaccttggtttatgctatcttccagagatttctgtt gttctcagctcccttgctttcattctcagtgggctggagtttgaacatgagcaactgtct ggattgaaactactggcctttttgattgagtggagacatgaaaatgcactcagaacaaat gaagcagtacatcacttcagcgaggagattgtttgtgttctgcccgttatcaaccttgtt atatctccatctaaatctgtcaaatcagtggcatctcatgttctatcaagatttcacgtg cttgttttagatttgctggcatcttgttcatctgaacaacaggacagctcaatggttcat cacataagcaaacctacatctattgttcctaaacttgtacatcatctatggtctcagtca tcttcatcgggtttcatttttacaaaatatataactagcagggggttagctgagtctgct ggaaattcgaccgaaccaaactattggacacatcaaataaacgagtacctgtcagccctt cgcaaggaaaagctttcactggacagcctgtcttcgaaaaagatacaatcagtagcaata tcatctctgctaagctctgcagtatctgttttggtaatgcacccaaaaattggtacttct gctgctcagtccttggctcttcttggtgcaacagacccaaaactgggtatgccgttgttg gtacttatcctcttctataccaaggtcctgtacagcaacaataactgcgatgcaaatatt ttgcttagtttgctagagtcattgccatcactcgctgtacatggttttgtgcttccactc tcactgcaattgatatcatcaatgcttaaaaaggacgtaaaatcggttctgtatcctata gctgttcgattgctttgcaagatgtggactgtcactgattgggcattccaaaacttgcaa ggaactctggatcctgaaaatttttccaattctgttgatgatagagaagttttcacaagt atagctgcatcagtacgtgatgtgtgcaagcagaacccagatagaggcgttgatctcata ctatctgtctcggcttgtattgagagtcgtgattctgttgttcaagctcttggcctggag agcctctcctatctctgcgaagaagatgtagttgatttctatactgcctggaaagttata tcaaagcagctgcttgatttttcgatagatcctactgtttcccatggcttatgcattcta ttgagatggggagcaatggattctgaagcatatcctggaacatcaaaacacttgatacaa atattgtggagcattggaacttacagggagaaaaatgttgaccctctctgggttaaagca agaggaactgcttttcagtccttgtcccactataagatctcgcttattaaagatgctatt cctgatttctggcggataaattatgaatgctttaccactgaacgaaatctggaagttctg aaagcaatggataacttccaggccgagattatcaattttgagcacattaaccgtcgtcga ttgactacggataaaataaccacagtgcataaatttgagaagctactggatgctttccct caggcggtgtttaaaggaaagtcagcgcatcatcggtttcctggtgcagctcttctaact ctcaattttaccccgaaggacatccttcatgaagggaaatctaaggatttgcctagagta catgctgcatatgaacaagcattagtggagatggctgaatctatgtatatatcaagaaat atggtggtagctcttcttgcactgcattcatggaaatcatttgtttcaaattggatgcaa gctgttattgcttgtctagacactaaagaatcctcaaagttgaacaaggcttcaaaagca gctgatgatatatttaagattctgtgcaagtgtgttcctgtatccactcctagtgttgtt gttagcattgctcttgctattggagcattgtgcttggttgttcctccaacagcccatcta gtaatctcttctgcatcagattttcttttgagatggctattccaatatgagcatgaacat caacagtggtccacggctctttctctgggactaatatcgaattgttttcatcccactgac aaaaggagcaagcttcaggttatcaatggactccttgaggtaatctcaaaaactgaaagc taccttgtaaaaggagcttgtggactcggattgggttattgttgccaagctcttttagcc agagcagataatgcagctgattcagaattagaagcgactacacaacttactgagcgtgca tcagttgaagaaattcttcacactttgacgacttcattagttcagctatgtccattttca tgctattccctcaagaagctaagtatttgtggaataaaatccttggaaggaatggaagaa aaatatgttagcttagaagatgatccttgggctgttgcaggacttgttcttggcctggga aactctgttgtttcactatataggcttggagcttatgaagctattattgaagtcaagaat atattgatatcatggataccagatgtggattctagctctttgttatttgatgaagaagat tcggcatcgctatgtatgggctcttgccttgcccttccatctgttttagctttttgccag aaggtggaattgctgaatgatgacttggatgctttgttcaatcgctacacttctttagct actaatctcctgagccttaagaaatctgggactatctttcagaatttgctgatggcgatc tgtattggtgctggatctttcctgtcttctatattgaatgatggggtgcatgctatgaaa tttactgatgtcaaagatcttcttgacactcttaaacacatatatacccatccatatcct cctcttgtccatttaggaggcatgcttggtactgtcaacgcttttggtgctggtgctgga gacctcactgggatctgtcggcagccgacaaattcacaaattaagcacgaaaaggagtca tctttggtgagaggtcctgtactcacaagttctgttggtgagactctttcaacgtcaatg attcaggagatatttcttcttgccaaggatgctgaggatgaccacataaaagattatgct gcatgggctatttcatttcttagaagcaggtggctatcaaagaatcagattatttttgat gatgattgttctcaaagaaattctagtgattccaatcaatcgacaagtttttctgatgaa agcttagtgtggaacttaagtcagtggttgagggatcttaacttcgaaaagcctgatagt atggtgtcaacaagtacagtcgcaactgttttgagatgcctttccaaagctcctagattg ccatctatagactggggggttattgtgcggcggtgcatgaatgttgaggcacacattcct gatatgttgacgaatcatcgtgatcctaaattattgagggaagaatgcctatatatttct ctagctcatgcaagtcatatcagtcctcttctgcactttattgatgatctgacagactta tccagattcaggagattagaaataaatttgcagtccattttgctccaatatttatcaacc ctaatgaaactcttctctctctcaagattagacaaattgtctgaggatttaattgagtac ttgtattcccccacatcttcgtacttggattactcatctgagcagagaagcatgttaaga acatcattctggaagggcatttgcgagtgtctagtggaggatgtatctgaagagtctagt ggtttctcatgtattaagaagtgcattcaaagcttgtcacctctcctgagtctccataaa gatggtcagcctgaattcatagaggagtggtctgctgctatcaaatgccttacagttgca cagaaaggtttgctgggtgatatgctgcaggtcgaaatttcgtcatccttcaatgagcta gagcatattgatgtggccaaaaagataatcatcagggcaagaatgtgttctagcggttgt ggttctgtagatgagctggggaacataaagactacaatactgagtacaaggcttgatggt gtctggtggaatgtccttgttgaagttgctggtgctctatattatgctgatagtcgtatg aaaaagcagtggcttctggatgcattagatattggctgtgttacagcccatccctccacg gtactccatttcgttggcctgctatgtggtagctgctgcatctatatgccacttctcatt gttaacccaacaaatgtactgagtgacttgcctgtcacccttccttcgtttctctctagc agcatttgggatgacctccggaactctgttgctgataagttatggttgttgaccgctcgc atctacacttgggcagaacagctgactcatagtgtcggcctcgcacgccatgaccatatt catggaagtgaagctgaaatggctatttttcttgccaatattctgcgctgtacttgcatt gcagtggaagatcacttggctgttgaaaagaagctaaaacttgcaaacctggaggctcta tga

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