Oryza glaberrima (African rice): 127770878
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Entry
127770878 CDS
T08853
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127770878
Spliceosome [BR:
ogl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127770878
Other components
Complex C specific factors
127770878
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GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127770878
NCBI-ProteinID:
XP_052152611
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Position
4:22045868..22047416
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AA seq
434 aa
AA seq
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MDHHCSSLFSPPAYCNSYYPPLPPQPGSLATNEIVARLMAQMNYEEGTGLGKYGHGIIDP
INPTKKYGKGGVGKFESLYDSDSDYDTGPPVEPKLERGTGKAEPKAVVNAEEVRAMDTLQ
REREAYAATRARERRHEKVRAYNMRWQRPPKHDAADDDDWEGITSGYTAIKRALKVVREQ
SESGKLTLGGLIHEFAGVKAKFPEEYRTNSMPYKAISFVAPLLHSQLSRQYSAGEYGGTE
PLLNRTLVMVEALKDTLGADASAAYPRLIHDLVMAPSLDAWWWSAEEPEPMLRFVNRWKG
LLPQATMDSILDEVILPTLVAAADVFRLTTWSSKPSVCVGMWIPHLGHTRLRIVYIIISR
RLRDHLCGGISDYDYKLALPWKKVFDPASWDEHIERHVLPHLRKALHDLEISLEAGLDMI
NRAMQGLEISVPEH
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccattgttcatcgttgttttcccctcccgcttactgcaattcctactatccc
ccgttgccgccgcagcccgggagcctggcgaccaacgagatagtggcgaggttgatggct
cagatgaactacgaggagggcaccggcctcggcaagtacggccacgggattatcgatccc
atcaacccgaccaaaaagtacgggaaaggaggcgttggcaaattcgagtcgttgtacgat
agcgattcagattacgacacagggccgcctgtagagcccaagctcgagcggggcaccggc
aaagcagagccgaaggctgttgtcaatgccgaggaggtccgcgccatggatacgctgcag
agagaacgcgaagcctatgccgccacgcgggcgcgggagcggcgccacgagaaggttcgg
gcctataacatgcgctggcaacgcccaccgaaacatgacgccgccgacgacgacgactgg
gaggggataacctccgggtacacggccatcaagcgcgccttgaaggtagtccgggagcag
agcgagtcggggaagctcacattgggcggcctgatccatgagttcgcgggagtgaaggcg
aagttcccggaggagtacaggacgaacagtatgccgtacaaggcgatcagcttcgtggcg
ccgctgctccactcgcagctgagccggcagtacagcgcaggtgagtatggaggcacggag
ccgttgctgaaccgtacacttgtcatggtagaagcgctcaaggacacgctgggagcggac
gcatcagcggcgtaccctcgcctgatccacgacctcgtgatggcgccttccttggatgcg
tggtggtggagcgctgaggagccagagcctatgctacgtttcgtcaatagatggaagggc
ctccttccgcaagctaccatggattccatcctggatgaggtcatcttgcccacgctggta
gccgcggcggacgtgtttaggctgacgacgtggtcgagtaagccgagtgtttgcgtgggc
atgtggattcctcatctcggccacacccgcctacgaatagtgtacatcattataagcagg
cggctcagagatcacctgtgcggcgggatctctgactatgactacaagcttgcattgcca
tggaaaaaggtgttcgatccagcgagctgggacgaacacattgagcggcacgtgctgcct
catctgaggaaggctctccatgatcttgagatctcgctcgaggctggcctcgacatgatc
aaccgtgcgatgcaagggctagagataagcgtgccggagcattag
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