Oryza glaberrima (African rice): 127770890
Help
Entry
127770890 CDS
T08853
Name
(RefSeq) probable calcium-binding protein CML22
KO
K13448
calcium-binding protein CML
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127770890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
AIF-1
EF-hand_4
EF-hand_9
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
127770890
NCBI-ProteinID:
XP_052152624
LinkDB
All DBs
Position
4:21592650..21593845
Genome browser
AA seq
251 aa
AA seq
DB search
MSCQVPTVPASPVVKFPLLPRGLLSYLPANLSSILPVARGAASTCEASSTTTTTMPPAPP
ASPPPPPKKMSPPGAGAGAGSKKKQQQQADAAELARVFELFDRNGDGRITREELEDSLGK
LGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEEEDGDM
REAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQ
MMRGGGFAALG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagttgccaggtccccacggtgcccgcctcgccggtcgttaagttcccactcctcccg
cgcggcctcctctcctacctccccgccaacctctcctccatcctcccagtcgcgcgcggc
gccgcctccacctgcgaggcttcttcgacgacgacgacaaccatgccgcctgcgccgcca
gcgtctcctcctcctcctcccaagaagatgtcaccgccgggagcgggagcgggagcgggg
agcaagaagaagcagcagcagcaggccgacgccgcggagctggcgcgcgtgttcgagctg
ttcgacaggaacggcgacgggcggatcacgcgggaggagctggaggactcgctggggaag
ctcgggatccccgtgccggccgacgagctggcggccgtgatcgcgcgcatcgacgccaac
ggcgacgggtgcgtggacgtcgaggagttcggggagctctaccgctccatcatggccggc
ggggacgacagcaaggacggccgcgccaaggaggaagaggaggaggaggacggcgacatg
agggaggcgttccgggtgttcgacgccaacggcgacgggtacatcacggtggacgagctc
ggcgccgtgctggcgtcgctggggctgaagcagggccgcacggcggaggagtgccgtcgc
atgatcggccaggtcgaccgcgacggcgacggccgcgtcgacttccacgagttcctccag
atgatgcgcggcggtgggttcgccgccctcggctga
DBGET
integrated database retrieval system
