Oryza glaberrima (African rice): 127770891
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Entry
127770891 CDS
T08853
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127770891
Spliceosome [BR:
ogl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127770891
Other components
Complex C specific factors
127770891
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Gene cluster
GFIT
Motif
Pfam:
GCFC
G-patch
Motif
Other DBs
NCBI-GeneID:
127770891
NCBI-ProteinID:
XP_052152625
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Position
4:22563692..22565431
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AA seq
549 aa
AA seq
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MASVGDEGRNQGGSLSHGETNAGQESETSDRTPPNFSNTKTSGVQEIAAAASKDVPTIHF
VRPGSLATNQIVARLMAQMNYEEGTGLGKYGHWIIDPINPTKKYEKGGVGKFDSSYDSDS
DYDTGPPVEHKLERGTGEAEPEAVVDVEEVRAMDTLQREREAYAAARAWERRHEKVRAYN
MRGQHPPKHATAADDWEGMTSRYTAIKRALKVVRELSESGKLMLGGLIHEFAGVKVKFPE
DYRTNRMPYKAISFAAPLLHSQLSWQYNAGEYGGTQPLLNRTLVMVEALKDKLGADASAA
YPRLIHDLVMAPPLDAWWWSAEEPEPMLRFVNRWKGLLPQATMDSILDEVILPTLVAATD
VFRPTRSSKLSVCVGMWILHLGHARLRIVYIISRRLRDWLCGGISEYDYKLALPWKKVFD
PASWDEHIERHVLPHLRKALYDLEISIRMTWLQNNNFFPLVMRWASIVSVKYMVPLLIQG
FFKKWMYANYRYLMGERPRLDEAMAWYEVWKGLFTPELLAEKRVVVHVEAGLDMINRATQ
GLEISVPEH
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtcggtgacgaggggagaaaccaaggtggtagtctttcccacggcgagact
aatgcaggccaagagtcggaaacatctgatcgcactcctcctaacttctccaacaccaag
actagtggcgtgcaggaaattgcggcggctgcaagcaaagatgtgcccaccatccacttt
gtgcgccctgggagcctggcaaccaaccagatagtggcaaggttgatggctcagatgaac
tacgaggagggcaccggccttggcaagtacggccactggattatcgatcccatcaacccg
accaaaaagtatgagaaaggaggcgttggcaaattcgactcgtcgtacgatagcgactcg
gattatgacacggggccgcctgtagagcacaagctcgagcggggcaccggcgaagcagag
ccggaggccgttgtcgacgtcgaggaggttcgtgccatggacacgctgcagagagagcgt
gaagcctatgccgccgcgcgggcgtgggagcggcgccacgagaaggttcgagcctataac
atgcgcgggcaacacccaccgaaacacgccaccgccgccgacgactgggaggggatgacc
tccaggtacacggcgatcaagcgtgccttgaaggtggtccgggagctgagcgagtcaggg
aagctcatgttgggcggcctgatccacgagttcgcgggagtgaaggtgaagttcccggag
gattacaggacaaaccgtatgccgtacaaggcgatcagcttcgcggcgccgctgctccac
tcgcagctgagctggcagtacaacgcaggtgagtacggaggcacgcagccgttgctgaac
cgtacacttgtcatggtagaagcgctcaaggacaagctgggagcggacgcatcggcggcg
taccctcgcctgatccacgacctcgtgatggcgccgcccttggatgcgtggtggtggagc
gctgaggagccggagccaatgctacggttcgtcaatagatggaagggcctccttccgcaa
gccaccatggattccatactagatgaggtcatcttgccgacgctggtagccgcgacggac
gtgtttaggccgacgaggtcgagtaagctgagcgtctgtgtgggcatgtggattcttcat
ctcggccacgcccgcctacgaatagtgtacattataagcaggcggctcagagattggctg
tgcggtgggatctctgagtacgactacaagcttgcgttgccatggaaaaaggtgttcgat
ccagcgagctgggatgaacacattgagcggcacgtgctgcctcatctgaggaaggctctc
tatgacctcgagatctcgataagaatgacttggctacaaaacaacaacttcttccctctt
gtaatgaggtgggcatccatcgtgtcggtgaagtacatggtgccacttttgatacaaggg
ttcttcaagaaatggatgtacgccaactatcggtacctaatgggcgagaggccccggttg
gatgaggcgatggcttggtatgaagtgtggaaagggcttttcacgccggaactgctcgcg
gagaagcgcgtggtcgtgcatgtcgaggctggcctcgacatgatcaaccgcgcgacacag
ggattggagataagcgtgccggagcattag
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