Oryza glaberrima (African rice): 127770944
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Entry
127770944 CDS
T08853
Name
(RefSeq) organic cation/carnitine transporter 4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127770944
Transporters [BR:
ogl02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
127770944
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
127770944
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
MFS_1_like
TMEM234
DUF1304
Motif
Other DBs
NCBI-GeneID:
127770944
NCBI-ProteinID:
XP_052152671
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Position
4:28498262..28502325
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AA seq
581 aa
AA seq
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LPNKTTRPDGLISCRQNTHNSQKYTTHKHRQLALPTNTTGRTVQKRIAPHTPPSDTHARR
PIERIAMSTEALLAGGGGEVRRRVSIDDALAWHAGEFGRWQLRHFVLVSSAWLLEALHTM
VIIFADREPAMVCAAGDGRCGDRCAGATAAGTGWEWAGGRASSTVSEWGLVCGERYKVGL
VQAIFFAGCMIGAGVFGHLSDSFLGRKGSLQVVCVLNGVFGMLTAMAPNYWAYAALRLLT
GFSAGSVGLCSFVLATEPVGPSRRGAAGMSTFYFFSGGIAALAGIAALFPTSWRMLYVVT
SVPSLVFVVAVLPFVSESPRWYLVRRRADDAMRVVRAIASSNGRSIPDDVSLKLDDEGDD
DNGAGAGKVVDSSASASGSIIDVFRSRTTRFRLVLSVVINLLASVVYYGLSLNVVNLKTN
LYVSVLVNSLAEMPAYLLTALLLDRFGRKPLAIGTMLLSGISCSAGSLIAGAGAMRVARL
ACGVVGIFGMAATYNLLFIYTAELFPTAVRNAALGCTSQASQMGAILAPLVVVLGERVPF
ALFGVSGLVGGFLVFCLPETKNKPMYDTMAGLEEGEKTLLK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
cttccaaataaaacaacacgccctgacggcctgattagctgcagacaaaacacacacaac
tcacagaagtacacaactcacaaacacaggcaacttgctctccctacaaatacaacaggg
cgcaccgtgcaaaaacgcatcgccccccacacgccaccgagcgacacgcatgcacgccga
ccgatcgagcggatagccatgtcgacggaggcgctcctcgccggcggcggcggcgaggtg
aggcggcgcgtgagcatcgacgacgcgctggcgtggcacgcgggggagttcgggcggtgg
cagctgcggcacttcgtgctggtgtcgtcggcgtggctgctggaggcgctgcacaccatg
gtcatcatcttcgccgaccgggagccggccatggtgtgcgcagccggggacggccggtgc
ggcgaccgctgcgccggcgccaccgccgcggggaccgggtgggagtgggccggcgggcgc
gcctcgtcgacggtgtccgagtggggcctcgtctgcggcgagcggtacaaggtcggcctc
gtccaggccatcttcttcgccggatgcatgataggcgccggcgtgttcggacacctatcg
gattcgttcctcggtcggaagggctcgctgcaggtggtctgcgtcctcaatggcgtcttc
ggcatgctcaccgcgatggcgcccaactactgggcgtacgccgcgctgcgcctcctcacc
ggcttcagcgccggcagcgtcggcctctgctccttcgtcctcgccaccgagcccgtcggc
ccctcccgacgcggcgccgcggggatgtccaccttctacttcttctccggcgggatcgcc
gccctcgccggcatcgcggcgctgttcccgacgtcctggaggatgctctacgtggtcacg
tccgtgccgtcgctcgtgttcgtcgtcgccgtgctgccgttcgtctcggagtccccgcgg
tggtacctcgtgcgccgccgcgccgacgacgcgatgcgcgtcgtgcgcgccatcgcgtcc
agcaatggcaggagcattcctgacgacgtgtccctcaagctcgacgacgagggagacgac
gacaacggcgccggcgcaggcaaggtcgtcgactcgtcagcgtcggcgtcgggctccatc
atcgacgtgttccggtcgcggacgacgaggttcaggctggtgctctcggtggtgatcaac
ctgctcgcctcggtggtgtactacggcctcagcctcaacgtcgtcaacctcaagaccaac
ctctacgtcagcgtcctggtgaactcgctcgccgagatgcccgcctacctcctcaccgcg
ctgctcctcgaccgcttcggccggaagccgctcgccatcggcaccatgcttctcagcggc
atctcctgctccgccggcagcctcatcgccggcgccggcgccatgagggtggcgaggctg
gcgtgcggggtggtggggatcttcggcatggcggcgacgtacaacctgctgttcatctac
acggcggagctgttcccgacggcggtgcggaacgcggcgctggggtgcacgtctcaggcg
tcgcagatgggcgccatcctggcgccgctggtggtggtgctcggggagcgcgtgccgttc
gcgctgttcggcgtgtcgggcctcgtcggcgggttcctcgtgttctgcctgccggagacg
aagaacaagcccatgtacgacaccatggccggcctggaggaaggggagaagaccctccta
aaatga
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